Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_J12
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    24   0.93 
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   4.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   6.5  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   8.6  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   8.6  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   8.6  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 263 YRKQSLVLHPDKETGDEKAFMRLTKAYQALTDDEAR 370
           YR   L ++ +K T + +   R+ K+Y    D E +
Sbjct: 431 YRNNDLSINEEKRTIENEQLNRMYKSYPNYIDKETK 466


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = +3

Query: 186 MRCQTLIRMKFWAYLLVQLRLK*RNHIV 269
           ++C T++ + FW++++  + L   N I+
Sbjct: 385 IQCLTVVCLAFWSFIVSTILLWFINKII 412


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +2

Query: 284 LHPDKETGDEKAFMRLTKAYQALTDDEARRNWEKYGNPD 400
           L P+    D + +++L     A   D  R+ W   G P+
Sbjct: 492 LKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPE 530


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 252 ISA*VAPGGRPKISYGSKFD 193
           ++A V    RP  SY SKFD
Sbjct: 11  MAAIVLVAARPDESYTSKFD 30


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 252 ISA*VAPGGRPKISYGSKFD 193
           ++A V    RP  SY SKFD
Sbjct: 11  MAAIVLVAARPDESYTSKFD 30


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 252 ISA*VAPGGRPKISYGSKFD 193
           ++A V    RP  SY SKFD
Sbjct: 11  MAAIVLVAARPDESYTSKFD 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,410
Number of Sequences: 438
Number of extensions: 2439
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)