Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_J11
(802 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1545|AAM68636.1| 86|Drosophila melanogaster CG33672-P... 73 3e-13
AY060627-1|AAL28175.1| 390|Drosophila melanogaster GH04687p pro... 46 8e-05
AE013599-1544|AAF58481.1| 390|Drosophila melanogaster CG33671-P... 46 8e-05
BT023619-1|AAY85019.1| 140|Drosophila melanogaster IP05796p pro... 38 0.016
AE014297-3592|AAF56322.1| 115|Drosophila melanogaster CG31126-P... 38 0.016
AE014134-771|AAF50982.2| 446|Drosophila melanogaster CG3294-PA,... 33 0.60
AY118319-1|AAM48348.1| 781|Drosophila melanogaster HL08052p pro... 30 4.2
AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like ... 30 4.2
AE014298-3026|AAF50901.1| 781|Drosophila melanogaster CG1692-PA... 30 4.2
BT011430-1|AAR99088.1| 804|Drosophila melanogaster RH70434p pro... 29 5.6
AE014298-1451|AAF46586.2| 804|Drosophila melanogaster CG32683-P... 29 5.6
X58826-1|CAA41631.1| 1135|Drosophila melanogaster RNA polymerase... 29 9.8
AY121645-1|AAM51972.1| 1146|Drosophila melanogaster LD14594p pro... 29 9.8
AE013599-1387|AAF58590.1| 1137|Drosophila melanogaster CG8344-PA... 29 9.8
>AE013599-1545|AAM68636.1| 86|Drosophila melanogaster CG33672-PA,
isoform A protein.
Length = 86
Score = 73.3 bits (172), Expect = 3e-13
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = +1
Query: 160 GCGAKFSVLIVSDKFKGKPLLARHRLVNTLLQEELKTIHAFTQKTLTVDQWK 315
GCG KFS +IVS F GK LL +HRLVN+ L EELK IHAF+QK+ T ++W+
Sbjct: 30 GCGGKFSAVIVSPAFSGKTLLQKHRLVNSTLAEELKEIHAFSQKSYTPEEWE 81
>AY060627-1|AAL28175.1| 390|Drosophila melanogaster GH04687p
protein.
Length = 390
Score = 45.6 bits (103), Expect = 8e-05
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = +2
Query: 473 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 652
V +PGKVILHGEH+VVY + A+A +GL +++ +++ + + L+ +P
Sbjct: 6 VHSPGKVILHGEHAVVYHRPALAAVVGLGTTLRFRQLEDSQVASFQLEALNCTLEIQLPE 65
Query: 653 EPTVKSLFHPKLAPGDNRQILLE 721
+ F K P D+ LLE
Sbjct: 66 FNGFLAEFRSKY-PSDSTANLLE 87
>AE013599-1544|AAF58481.1| 390|Drosophila melanogaster CG33671-PA,
isoform A protein.
Length = 390
Score = 45.6 bits (103), Expect = 8e-05
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = +2
Query: 473 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 652
V +PGKVILHGEH+VVY + A+A +GL +++ +++ + + L+ +P
Sbjct: 6 VHSPGKVILHGEHAVVYHRPALAAVVGLGTTLRFRQLEDSQVASFQLEALNCTLEIQLPE 65
Query: 653 EPTVKSLFHPKLAPGDNRQILLE 721
+ F K P D+ LLE
Sbjct: 66 FNGFLAEFRSKY-PSDSTANLLE 87
>BT023619-1|AAY85019.1| 140|Drosophila melanogaster IP05796p
protein.
Length = 140
Score = 37.9 bits (84), Expect = 0.016
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +1
Query: 175 FSVLIVSDKFKGKPLLARHRLVNTLLQEELKT-----IHAFTQKTLTVDQWKTQ 321
F V +VS+KF L+ RHRLVN ++ LK +HA + + T QW+ +
Sbjct: 72 FRVFVVSEKFNDLTLIKRHRLVNDTVKNALKEAGFEFMHALSIEAKTPKQWEPE 125
>AE014297-3592|AAF56322.1| 115|Drosophila melanogaster CG31126-PA
protein.
Length = 115
Score = 37.9 bits (84), Expect = 0.016
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +1
Query: 175 FSVLIVSDKFKGKPLLARHRLVNTLLQEELKT-----IHAFTQKTLTVDQWKTQ 321
F V +VS+KF L+ RHRLVN ++ LK +HA + + T QW+ +
Sbjct: 47 FRVFVVSEKFNDLTLIKRHRLVNDTVKNALKEAGFEFMHALSIEAKTPKQWEPE 100
>AE014134-771|AAF50982.2| 446|Drosophila melanogaster CG3294-PA,
isoform A protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.60
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 523 RKNCDRCQPRPKELHSDKGSKHSTRTSSPHTFAVRGSTGDH 645
R DR R K HS GS H R S H +T DH
Sbjct: 400 RSRSDRSSVRSKREHSSSGSSHDDRRSKRHHHHHNSTTPDH 440
>AY118319-1|AAM48348.1| 781|Drosophila melanogaster HL08052p
protein.
Length = 781
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 567 MELLRPRLTAIAVFPYTTECSPCKMTFPGAETLT 466
++LLRP+L +A++P C+ K+ PG+ LT
Sbjct: 506 VQLLRPKLLQMAIYP-VKSCAAFKIELPGSWPLT 538
>AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like
protein protein.
Length = 737
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 567 MELLRPRLTAIAVFPYTTECSPCKMTFPGAETLT 466
++LLRP+L +A++P C+ K+ PG+ LT
Sbjct: 506 VQLLRPKLLQMAIYP-VKSCAAFKIELPGSWPLT 538
>AE014298-3026|AAF50901.1| 781|Drosophila melanogaster CG1692-PA
protein.
Length = 781
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 567 MELLRPRLTAIAVFPYTTECSPCKMTFPGAETLT 466
++LLRP+L +A++P C+ K+ PG+ LT
Sbjct: 506 VQLLRPKLLQMAIYP-VKSCAAFKIELPGSWPLT 538
>BT011430-1|AAR99088.1| 804|Drosophila melanogaster RH70434p
protein.
Length = 804
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 511 FGRVRKNCDRCQPRPKELHSDKGSKHSTRTSSPHTFA-VRGSTGDHSIG 654
FGR + ++C P +S +H PHT A V G G S+G
Sbjct: 356 FGRSKSEIEKCPNDPFHSYSKSFQEHCDSMLPPHTGAGVTGGIGGVSVG 404
>AE014298-1451|AAF46586.2| 804|Drosophila melanogaster CG32683-PA
protein.
Length = 804
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 511 FGRVRKNCDRCQPRPKELHSDKGSKHSTRTSSPHTFA-VRGSTGDHSIG 654
FGR + ++C P +S +H PHT A V G G S+G
Sbjct: 356 FGRSKSEIEKCPNDPFHSYSKSFQEHCDSMLPPHTGAGVTGGIGGVSVG 404
>X58826-1|CAA41631.1| 1135|Drosophila melanogaster RNA polymerase
III second-largestsubunit protein.
Length = 1135
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = -2
Query: 684 LGWNRLLTVGSNGMVSCR---STHGK 616
L WN++LT NG+V C+ STH K
Sbjct: 191 LSWNKMLTEDFNGVVQCQVTSSTHEK 216
>AY121645-1|AAM51972.1| 1146|Drosophila melanogaster LD14594p
protein.
Length = 1146
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = -2
Query: 684 LGWNRLLTVGSNGMVSCR---STHGK 616
L WN++LT NG+V C+ STH K
Sbjct: 201 LSWNKMLTEDFNGVVQCQVTSSTHEK 226
>AE013599-1387|AAF58590.1| 1137|Drosophila melanogaster CG8344-PA
protein.
Length = 1137
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = -2
Query: 684 LGWNRLLTVGSNGMVSCR---STHGK 616
L WN++LT NG+V C+ STH K
Sbjct: 192 LSWNKMLTEDFNGVVQCQVTSSTHEK 217
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,961,994
Number of Sequences: 53049
Number of extensions: 782202
Number of successful extensions: 2293
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2293
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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