Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_J07
(733 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 55 1e-08
SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 33 0.042
SPCC613.06 |rpl902|rpl9-2|60S ribosomal protein L9|Schizosacchar... 28 1.2
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 27 2.8
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 27 3.6
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 27 3.6
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 26 4.8
SPAC20G4.06c |adf1|cof1|cofilin|Schizosaccharomyces pombe|chr 1|... 25 8.4
SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyc... 25 8.4
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo... 25 8.4
SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p... 25 8.4
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 25 8.4
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 25 8.4
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 25 8.4
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 25 8.4
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 54.8 bits (126), Expect = 1e-08
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Frame = +2
Query: 335 IRAAYEDVRSDTTPTEWAVFKFE---GARIVCSARGSDFTEFRTQFSDDERAFGYLRLQM 505
IR YE V S WA+F +E G + A G+D EF +F ++ FG+LR++
Sbjct: 14 IRNVYEKVLSGADDCSWAIFGYEKGQGNILKVVASGNDNDEFLDEFDENAVLFGFLRVK- 72
Query: 506 GDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQFK 685
D + KF+ + W G + + S A + +++ + V++ S++++D
Sbjct: 73 -DVNTGLNKFVLVCWCGE--AAARKGLFSIHMATVSNLLKGYHVQITGRESSDLNMDDII 129
Query: 686 DALNRAGGANY 718
+ A G+ Y
Sbjct: 130 RRVADASGSKY 140
>SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 230
Score = 33.1 bits (72), Expect = 0.042
Identities = 26/93 (27%), Positives = 46/93 (49%)
Frame = -2
Query: 627 FDMMSLMIALSVDILARLITDTFGPTHVMNINFLRLDISSPICNLRYPNARSSSENCVRN 448
F ++S+ A+S ++ TF P+ ++IN+ L P R + SSS + +
Sbjct: 6 FLLISIFTAISYLVVDGATPRTFAPSASVSINYGTLSTVFPSLYRRASTSSSSSSSSIST 65
Query: 447 SVKSLPLAEHTIRAPSNLNTAHSVGVVSDLTSS 349
S S P + +PS+ +T+ S G S +T+S
Sbjct: 66 SHDSQPSTSSS--SPSSTSTSSSSG-TSVITAS 95
>SPCC613.06 |rpl902|rpl9-2|60S ribosomal protein
L9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 189
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -2
Query: 630 KFDMMSLMIALSVDILARLITDTFGPTHVMNINFLRLDI 514
K + +++ +SVDI ARL+T GP V+ N R+DI
Sbjct: 7 KDETLTIPEGVSVDIKARLVT-VKGPRGVLKQNLRRVDI 44
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 380 EWAVFKFEGARIVCSARGSDFTEFRTQFSDDERAF 484
EW VF R + +DF +FR+Q DDE F
Sbjct: 888 EWNVFAQYKRR---ESNATDFEDFRSQVGDDESKF 919
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 3.6
Identities = 23/93 (24%), Positives = 40/93 (43%)
Frame = +2
Query: 320 LDRETIRAAYEDVRSDTTPTEWAVFKFEGARIVCSARGSDFTEFRTQFSDDERAFGYLRL 499
L +ET E +T T + + +G R S +DF T SD E + L L
Sbjct: 685 LSKETFNFGGEANCENTDTTLFTTWGDQGFRPSDSICYNDFNLLETANSDAEASIHELEL 744
Query: 500 QMGDEMSKRKKFMFMTWVGPNVSVINRAKMSTD 598
Q + +++R+ + T + P+ ++ R D
Sbjct: 745 QPLNAVNEREVDISQTDMTPSTALDTRVDTRVD 777
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 571 HRHVRSYPRHEHKFLAFRHLVSHLQPEVSEC 479
H +RS+ + KFL HL+ HL S C
Sbjct: 23 HFWLRSFMSNNRKFLVHIHLIPHLNSLYSIC 53
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 4.8
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 425 ARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKA 604
+R F FR +D +R +LRL SKR K + W NVS+++ ++ K
Sbjct: 212 SRFQTFETFRKPLAD-KRRIEFLRL------SKRMKKLEELWTSENVSMLDALLLNKAKR 264
Query: 605 IIKDII 622
+ + I+
Sbjct: 265 LEQSIV 270
>SPAC20G4.06c |adf1|cof1|cofilin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 137
Score = 25.4 bits (53), Expect = 8.4
Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Frame = +2
Query: 383 WAVFKFEGAR--IVCSARGSD--FTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFMFMTW 550
+ VFK + IV + +D F F + + + + R K +F++W
Sbjct: 27 YVVFKMNDTKTEIVVEKKSTDKDFDTFLGDLPEKDCRYAIYDFEFNLGEGVRNKIIFISW 86
Query: 551 VGPNVSVINRAKM--STDKAIIKDIISNFAVELQLENQSEIDIDQFKDALNR 700
P+V+ I ++KM S+ K ++ + ++Q + SE+ + + + R
Sbjct: 87 -SPDVAPI-KSKMVYSSSKDTLRRAFTGIGTDIQATDFSEVAYETVLEKVTR 136
>SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 313 RHGYFSRSILHNSFVFQTLRHCS 245
R YF+++ LH FVF L CS
Sbjct: 36 RRKYFTKTHLHRLFVFVVLLLCS 58
>SPAC1805.15c |pub2||ubiquitin-protein ligase
Pub2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 456 RSSLMMNAHSDTSGCRWETR 515
+S + + D SGC WETR
Sbjct: 141 KSQICTDIIDDASGCAWETR 160
>SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 728
Score = 25.4 bits (53), Expect = 8.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 269 IPNPPTLLSRITMITAEYSLSVRYVASNG 183
I P LLS++ ++ E S SVRY+AS G
Sbjct: 414 IEPPQPLLSQLILVD-EISFSVRYLASLG 441
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 656 QSEIDIDQFKDALNRAGGANYGTG 727
+S++D+ FK+ LNR GA G
Sbjct: 591 RSDVDMTHFKNILNRGNGAGIVLG 614
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 25.4 bits (53), Expect = 8.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 585 LARLITDTFGPTHVMNINFLRLDISSPICNLRYPNARSSSENCVRNSVKSLPLAEHTI 412
LAR I D P ++ N L LD+ S + ++ R E +++ +K + +E I
Sbjct: 222 LARRIIDDDVPANLSNCKLLSLDVGSLVAGSKF---RGEFEERIKSVLKEVEESETPI 276
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = -2
Query: 432 PLAEHTIRAPSNLNTAHSVGVVSDLTSS*AALIVSRS 322
PLA+ + + N AH + + +++++S ++I+ RS
Sbjct: 612 PLAKKPLPVSGHTNNAHPLRLSTEISASQLSMIIERS 648
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 25.4 bits (53), Expect = 8.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 413 IVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFMFM 544
++ S+ G D+ + R S + A+G + D++SK K+FMF+
Sbjct: 904 VIWSSGGVDY-DLRPHHSVPDTAYGMAK----DKLSKPKRFMFL 942
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,934,864
Number of Sequences: 5004
Number of extensions: 58482
Number of successful extensions: 191
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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