Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_J07
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.8  
AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    25   3.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   5.6  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   5.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.7  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   9.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
 Frame = +2

Query: 356  VRSDTTPTEWAVFKFEGARIVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKF 535
            VR D      + + +    +  S+ G+ F   +    D+E+ FG+             K 
Sbjct: 1211 VRLDQDELRTSSYNYHPRDVHLSSEGAMFYRVKVAPGDNEKRFGWYEQATNSSTGATTKK 1270

Query: 536  MFMTWVGPNVSVINRAKMSTDK-AIIKDI 619
             F    G +V+V  + K  +++ A +KD+
Sbjct: 1271 SFAA-DGTDVTVREKPKQESNRDADVKDL 1298


>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 543 MNINFLRLDIS-SPICNLRYPNARSSSENCVRNSVKSLPLAEHTIRAPSNLN 391
           +N+N +R  ++ + +  L     +++ E     +V  + + EHTIR P N++
Sbjct: 88  INVNRMRRAVTDADLAKLERKLRQAADEGSTNGTV--ITIGEHTIRLPHNIS 137


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 140  PFRWLLNXSLSNTSVRLMRHTELKD 214
            P R +LN  L N   R  +HTE  D
Sbjct: 1480 PIRHILNSPLLNRRQRKKQHTESSD 1504


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +1

Query: 52  VXFISFLLXIIXLXGTVLXPLXFVPVRRSTIPVAVK 159
           V  I  ++ ++ +      P  F+ VRR T+P+  +
Sbjct: 485 VWMIKMMVTVVIVFTICWLPFNFLMVRRGTVPLPAR 520


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 511 VSHLQPEVSECAFIIRELRAELREVTTPGRA 419
           V HL P  +E   I+    AE  ++ T GRA
Sbjct: 222 VDHLLPSPAEQCRILASKPAETIKIDTSGRA 252


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 511 VSHLQPEVSECAFIIRELRAELREVTTPGRA 419
           V HL P  +E   I+    AE  ++ T GRA
Sbjct: 223 VDHLLPSPAEQCRILASKPAETIKIDTSGRA 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 782,929
Number of Sequences: 2352
Number of extensions: 15916
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)