Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_J07
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81568-3|CAB04592.1|  643|Caenorhabditis elegans Hypothetical pr...    40   0.002
U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical pr...    32   0.48 
U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical pr...    32   0.48 
U37429-9|AAA79344.3|  796|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z48717-8|CAA88609.1|  518|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z48717-1|CAA88603.1|  520|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z50797-4|CAA90674.1|  339|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>Z81568-3|CAB04592.1|  643|Caenorhabditis elegans Hypothetical
           protein K08E3.4 protein.
          Length = 643

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 4/131 (3%)
 Frame = +2

Query: 335 IRAAYEDVRSDTTPTEWAVFKFEG----ARIVCSARGSDFTEFRTQFSDDERAFGYLRLQ 502
           I A+Y     D+   +W +F +EG     R+     G    EF   FS  +  FG + ++
Sbjct: 12  IEASYRRASDDSDGDKWVIFDYEGNSNTLRVKEEGTGG-LEEFADSFSSGKLQFGVISVR 70

Query: 503 MGDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVELQLENQSEIDIDQF 682
           +  ++    K + + W G  V  +  A  +      +  +    + L   ++ +I+ D  
Sbjct: 71  LSSDVF--PKIVLVHWQGEGVPTLRLASTTPHAEEFRRFLKTVHIVLHARSEIDIEPDAI 128

Query: 683 KDALNRAGGAN 715
           +  + +   AN
Sbjct: 129 RKEVRKLPAAN 139


>U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical
           protein F11D5.1c protein.
          Length = 769

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
 Frame = -2

Query: 696 LSASLNWSMSISD*FSSCNSTAKFDMMSLMIALSVDILARLITDTFGPTHVMNINFLRLD 517
           +S++L W  +I+    S   +    + S   A  +  ++R + D    + + + N + + 
Sbjct: 398 ISSNL-WKPTINSPTMSTTESTISPVASSPTASKLPFVSRKVDDVGAKSMITSSNVVSIS 456

Query: 516 ISSPICNLRYPNARSSSENCVRNSVKSLPLAEHTIRAPSNLNTA-HSVGVVSDLTSS*AA 340
           + +P+ N  Y N   + E    +   + PL      +PS  +T+ +SV + S      + 
Sbjct: 457 VKAPVSNRIYSNYDKTDETTTDSMRSTAPLKPPITYSPSYTSTSLNSVSLSSKYVEEKSK 516

Query: 339 LIVSRSRPVV 310
                + PVV
Sbjct: 517 TSQGSTAPVV 526


>U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical
           protein F11D5.1a protein.
          Length = 812

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
 Frame = -2

Query: 696 LSASLNWSMSISD*FSSCNSTAKFDMMSLMIALSVDILARLITDTFGPTHVMNINFLRLD 517
           +S++L W  +I+    S   +    + S   A  +  ++R + D    + + + N + + 
Sbjct: 441 ISSNL-WKPTINSPTMSTTESTISPVASSPTASKLPFVSRKVDDVGAKSMITSSNVVSIS 499

Query: 516 ISSPICNLRYPNARSSSENCVRNSVKSLPLAEHTIRAPSNLNTA-HSVGVVSDLTSS*AA 340
           + +P+ N  Y N   + E    +   + PL      +PS  +T+ +SV + S      + 
Sbjct: 500 VKAPVSNRIYSNYDKTDETTTDSMRSTAPLKPPITYSPSYTSTSLNSVSLSSKYVEEKSK 559

Query: 339 LIVSRSRPVV 310
                + PVV
Sbjct: 560 TSQGSTAPVV 569


>U37429-9|AAA79344.3|  796|Caenorhabditis elegans Hypothetical
           protein F09E5.5 protein.
          Length = 796

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -1

Query: 664 LRLIFKLQLHSKVRYDVLDDSFVGGHLGSVDHRHVRSYPRHEHKFLAFRHLVSHLQPEVS 485
           L+ IF LQ   +   D LDD   GG+L  + H+H+    R   + LA  H +S    E  
Sbjct: 113 LKHIFNLQTTLQEIRDALDDEKSGGNL-LLAHKHIMDLERARDELLAEVHKMSGTNTEKE 171

Query: 484 ECAFI 470
           +   +
Sbjct: 172 QMLLV 176


>Z48717-8|CAA88609.1|  518|Caenorhabditis elegans Hypothetical
           protein T10B9.10 protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +2

Query: 461 FSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVE 640
           + DD   F   R + GDE+   K       +GP + +  R  M   K ++ +I+ N+  E
Sbjct: 429 WGDDVNEFKPERWESGDELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFE 488


>Z48717-1|CAA88603.1|  520|Caenorhabditis elegans Hypothetical
           protein T10B9.1 protein.
          Length = 520

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/66 (22%), Positives = 28/66 (42%)
 Frame = +2

Query: 461 FSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKAIIKDIISNFAVE 640
           + DD   F   R + GDE+   K       +GP + +  R  M  +K ++  I+  +  +
Sbjct: 429 WGDDASEFKPERWETGDELFYAKGGYLPFGMGPRICIGMRLAMMEEKLLLTHILKKYTFD 488

Query: 641 LQLENQ 658
              E +
Sbjct: 489 TSTETE 494


>Z50797-4|CAA90674.1|  339|Caenorhabditis elegans Hypothetical
           protein T22H6.3 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 347 YEDVRSDTTPTEWAVFKFEGARIVCSARGSDFT 445
           Y+   +DTTP  W +F+  G  I C    S F+
Sbjct: 184 YKSPDTDTTPAHWNLFQLFGLAICCVIMTSCFS 216


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,902,348
Number of Sequences: 27780
Number of extensions: 351534
Number of successful extensions: 908
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)