Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_J02
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   1.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   6.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.1  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +1

Query: 190 PFRVIEREIVKQRRNAFFFFLNNSHIA-YSF 279
           PF      + K RR   F++++   IA Y+F
Sbjct: 215 PFEAAREVVAKNRRGELFYYMHQQIIARYNF 245


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 145 GNTRRRVRCDCAGES 101
           G T R VRC CAG +
Sbjct: 912 GTTARVVRCVCAGST 926


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 199 VIEREIVKQRRNAFFFFLNNSHIAYSFGH 285
           +IE  I+   RN +  F N  HI   + H
Sbjct: 346 IIESSILSPNRNYYGDFHNMGHILIGYIH 374


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
 Frame = -3

Query: 263 CELFKKKKNAFLLCFTISRSITRNGCNALYF------FFVFALCC 147
           C + K    A  +   ++ S+T + C   Y       FF FA+CC
Sbjct: 38  CRILKYFIIAIYVLTILTSSVTLHVCFNSYMYAFTHIFFFFAICC 82


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 69  SYAESTIAPGAVVGVKRISIGRP 1
           ++ E T+ PG  V +K I+ G P
Sbjct: 419 AFNEETVQPGNSVFLKCIASGNP 441


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,671
Number of Sequences: 336
Number of extensions: 3256
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)