Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_J02
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113529-1|AAM29534.1|  389|Drosophila melanogaster RE60714p pro...    30   3.0  
AE014297-8|ABI31117.1|  389|Drosophila melanogaster CG14636-PB, ...    30   3.0  
AE014297-7|AAF52170.2|  389|Drosophila melanogaster CG14636-PA, ...    30   3.0  
AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p pro...    29   6.9  
AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-P...    29   6.9  
BT022870-1|AAY55286.1|  413|Drosophila melanogaster IP12784p pro...    29   9.1  
AE014298-2433|AAF48632.1|  413|Drosophila melanogaster CG9777-PA...    29   9.1  

>AY113529-1|AAM29534.1|  389|Drosophila melanogaster RE60714p
           protein.
          Length = 389

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +3

Query: 573 RTELKVSRSLNPHDTQTLNVXSKSGHVTQLIVKKKEK 683
           RTEL+  R+L+P   + +N  S +G   +++V K  +
Sbjct: 42  RTELRFGRNLDPSKVRVINFKSSTGDDVEILVGKNSR 78


>AE014297-8|ABI31117.1|  389|Drosophila melanogaster CG14636-PB,
           isoform B protein.
          Length = 389

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +3

Query: 573 RTELKVSRSLNPHDTQTLNVXSKSGHVTQLIVKKKEK 683
           RTEL+  R+L+P   + +N  S +G   +++V K  +
Sbjct: 42  RTELRFGRNLDPSKVRVINFKSSTGDDVEILVGKNSR 78


>AE014297-7|AAF52170.2|  389|Drosophila melanogaster CG14636-PA,
           isoform A protein.
          Length = 389

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +3

Query: 573 RTELKVSRSLNPHDTQTLNVXSKSGHVTQLIVKKKEK 683
           RTEL+  R+L+P   + +N  S +G   +++V K  +
Sbjct: 42  RTELRFGRNLDPSKVRVINFKSSTGDDVEILVGKNSR 78


>AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p
           protein.
          Length = 121

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 54  CSRRMIGYTTSNLRHQLSPA 113
           C RR IGYT S + HQ+S A
Sbjct: 99  CVRRSIGYTMSFIHHQMSQA 118


>AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-PA
           protein.
          Length = 121

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 54  CSRRMIGYTTSNLRHQLSPA 113
           C RR IGYT S + HQ+S A
Sbjct: 99  CVRRSIGYTMSFIHHQMSQA 118


>BT022870-1|AAY55286.1|  413|Drosophila melanogaster IP12784p
           protein.
          Length = 413

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
 Frame = +3

Query: 33  PPHRVLXCSRRMIGYTTSNLRHQLSPAQSHLTRRRVLPTT-----QREYKKKIKCIT--- 188
           P H+     RR+    +     Q++PA + +T +R +PTT     QR +K K K  T   
Sbjct: 258 PTHKEWEEQRRLKAENSQTTVDQMTPATT-MTAKRYIPTTKEWDEQRRFKLKAKMETKKN 316

Query: 189 AVPSYRTRNSEAEKKR 236
           A  +  T    AEK++
Sbjct: 317 ATSANSTNELGAEKRK 332


>AE014298-2433|AAF48632.1|  413|Drosophila melanogaster CG9777-PA
           protein.
          Length = 413

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
 Frame = +3

Query: 33  PPHRVLXCSRRMIGYTTSNLRHQLSPAQSHLTRRRVLPTT-----QREYKKKIKCIT--- 188
           P H+     RR+    +     Q++PA + +T +R +PTT     QR +K K K  T   
Sbjct: 258 PTHKEWEEQRRLKAENSQTTVDQMTPATT-MTAKRYIPTTKEWDEQRRFKLKAKMETKKN 316

Query: 189 AVPSYRTRNSEAEKKR 236
           A  +  T    AEK++
Sbjct: 317 ATSANSTNELGAEKRK 332


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,715,612
Number of Sequences: 53049
Number of extensions: 581608
Number of successful extensions: 1611
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)