Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_I19
(727 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060627-1|AAL28175.1| 390|Drosophila melanogaster GH04687p pro... 46 7e-05
AE013599-1544|AAF58481.1| 390|Drosophila melanogaster CG33671-P... 46 7e-05
AE014134-771|AAF50982.2| 446|Drosophila melanogaster CG3294-PA,... 33 0.52
BT010306-1|AAQ23624.1| 1062|Drosophila melanogaster GH01369p pro... 31 1.6
AE014298-2774|AAF48889.2| 1038|Drosophila melanogaster CG7058-PA... 31 1.6
AY118319-1|AAM48348.1| 781|Drosophila melanogaster HL08052p pro... 30 3.7
AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like ... 30 3.7
AE014298-3026|AAF50901.1| 781|Drosophila melanogaster CG1692-PA... 30 3.7
BT011430-1|AAR99088.1| 804|Drosophila melanogaster RH70434p pro... 29 4.9
AE014298-1451|AAF46586.2| 804|Drosophila melanogaster CG32683-P... 29 4.9
X58826-1|CAA41631.1| 1135|Drosophila melanogaster RNA polymerase... 29 8.5
AY121645-1|AAM51972.1| 1146|Drosophila melanogaster LD14594p pro... 29 8.5
AE013599-1387|AAF58590.1| 1137|Drosophila melanogaster CG8344-PA... 29 8.5
>AY060627-1|AAL28175.1| 390|Drosophila melanogaster GH04687p
protein.
Length = 390
Score = 45.6 bits (103), Expect = 7e-05
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = +2
Query: 158 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 337
V +PGKVILHGEH+VVY + A+A +GL +++ +++ + + L+ +P
Sbjct: 6 VHSPGKVILHGEHAVVYHRPALAAVVGLGTTLRFRQLEDSQVASFQLEALNCTLEIQLPE 65
Query: 338 EPTVKSLFHPKLAPGDNRQILLE 406
+ F K P D+ LLE
Sbjct: 66 FNGFLAEFRSKY-PSDSTANLLE 87
Score = 33.5 bits (73), Expect = 0.30
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 582 ISMGSELTIGAGTGSSASFAVCLAGALIQL 671
+ + S+LT+GAG GSSASF LA + L
Sbjct: 141 VQVDSQLTVGAGLGSSASFGAALATTFLIL 170
>AE013599-1544|AAF58481.1| 390|Drosophila melanogaster CG33671-PA,
isoform A protein.
Length = 390
Score = 45.6 bits (103), Expect = 7e-05
Identities = 27/83 (32%), Positives = 44/83 (53%)
Frame = +2
Query: 158 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 337
V +PGKVILHGEH+VVY + A+A +GL +++ +++ + + L+ +P
Sbjct: 6 VHSPGKVILHGEHAVVYHRPALAAVVGLGTTLRFRQLEDSQVASFQLEALNCTLEIQLPE 65
Query: 338 EPTVKSLFHPKLAPGDNRQILLE 406
+ F K P D+ LLE
Sbjct: 66 FNGFLAEFRSKY-PSDSTANLLE 87
Score = 33.5 bits (73), Expect = 0.30
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 582 ISMGSELTIGAGTGSSASFAVCLAGALIQL 671
+ + S+LT+GAG GSSASF LA + L
Sbjct: 141 VQVDSQLTVGAGLGSSASFGAALATTFLIL 170
>AE014134-771|AAF50982.2| 446|Drosophila melanogaster CG3294-PA,
isoform A protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.52
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 208 RKNCDRCQPRPKELHSDKGSKHSTRTSSPHTFAVRGSTGDH 330
R DR R K HS GS H R S H +T DH
Sbjct: 400 RSRSDRSSVRSKREHSSSGSSHDDRRSKRHHHHHNSTTPDH 440
>BT010306-1|AAQ23624.1| 1062|Drosophila melanogaster GH01369p
protein.
Length = 1062
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 369 NWHQGITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNSLR 518
N +QG++ K S L K +DY+ ++ HL +P + N KN+LR
Sbjct: 778 NLNQGLSEKDSMYLDRKQYYDYNSIKLNLIRHLCEPPIAASSNLSKNALR 827
>AE014298-2774|AAF48889.2| 1038|Drosophila melanogaster CG7058-PA
protein.
Length = 1038
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 369 NWHQGITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNSLR 518
N +QG++ K S L K +DY+ ++ HL +P + N KN+LR
Sbjct: 754 NLNQGLSEKDSMYLDRKQYYDYNSIKLNLIRHLCEPPIAASSNLSKNALR 803
>AY118319-1|AAM48348.1| 781|Drosophila melanogaster HL08052p
protein.
Length = 781
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 252 MELLRPRLTAIAVFPYTTECSPCKMTFPGAETLT 151
++LLRP+L +A++P C+ K+ PG+ LT
Sbjct: 506 VQLLRPKLLQMAIYP-VKSCAAFKIELPGSWPLT 538
>AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like
protein protein.
Length = 737
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 252 MELLRPRLTAIAVFPYTTECSPCKMTFPGAETLT 151
++LLRP+L +A++P C+ K+ PG+ LT
Sbjct: 506 VQLLRPKLLQMAIYP-VKSCAAFKIELPGSWPLT 538
>AE014298-3026|AAF50901.1| 781|Drosophila melanogaster CG1692-PA
protein.
Length = 781
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 252 MELLRPRLTAIAVFPYTTECSPCKMTFPGAETLT 151
++LLRP+L +A++P C+ K+ PG+ LT
Sbjct: 506 VQLLRPKLLQMAIYP-VKSCAAFKIELPGSWPLT 538
>BT011430-1|AAR99088.1| 804|Drosophila melanogaster RH70434p
protein.
Length = 804
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 196 FGRVRKNCDRCQPRPKELHSDKGSKHSTRTSSPHTFA-VRGSTGDHSIG 339
FGR + ++C P +S +H PHT A V G G S+G
Sbjct: 356 FGRSKSEIEKCPNDPFHSYSKSFQEHCDSMLPPHTGAGVTGGIGGVSVG 404
>AE014298-1451|AAF46586.2| 804|Drosophila melanogaster CG32683-PA
protein.
Length = 804
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 196 FGRVRKNCDRCQPRPKELHSDKGSKHSTRTSSPHTFA-VRGSTGDHSIG 339
FGR + ++C P +S +H PHT A V G G S+G
Sbjct: 356 FGRSKSEIEKCPNDPFHSYSKSFQEHCDSMLPPHTGAGVTGGIGGVSVG 404
>X58826-1|CAA41631.1| 1135|Drosophila melanogaster RNA polymerase
III second-largestsubunit protein.
Length = 1135
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = -2
Query: 369 LGWNRLLTVGSNGMVSCR---STHGK 301
L WN++LT NG+V C+ STH K
Sbjct: 191 LSWNKMLTEDFNGVVQCQVTSSTHEK 216
>AY121645-1|AAM51972.1| 1146|Drosophila melanogaster LD14594p
protein.
Length = 1146
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = -2
Query: 369 LGWNRLLTVGSNGMVSCR---STHGK 301
L WN++LT NG+V C+ STH K
Sbjct: 201 LSWNKMLTEDFNGVVQCQVTSSTHEK 226
>AE013599-1387|AAF58590.1| 1137|Drosophila melanogaster CG8344-PA
protein.
Length = 1137
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = -2
Query: 369 LGWNRLLTVGSNGMVSCR---STHGK 301
L WN++LT NG+V C+ STH K
Sbjct: 192 LSWNKMLTEDFNGVVQCQVTSSTHEK 217
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,971,439
Number of Sequences: 53049
Number of extensions: 856039
Number of successful extensions: 2887
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2887
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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