Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_I19
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006762-4|AAU20835.1|  484|Caenorhabditis elegans Hypothetical ...    55   6e-08
AC006762-3|AAU20834.1|  614|Caenorhabditis elegans Hypothetical ...    55   6e-08
AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical ...    55   6e-08
AC006762-1|AAU87813.1|  514|Caenorhabditis elegans Hypothetical ...    55   6e-08
AF078787-4|AAC26952.2|  274|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z81570-5|CAB04605.2|  321|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z70037-1|CAA93878.1|  493|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   5.9  
AC006762-8|AAP31426.1|  295|Caenorhabditis elegans Hypothetical ...    28   5.9  
AC006762-7|AAF60555.1|  375|Caenorhabditis elegans Hypothetical ...    28   5.9  

>AC006762-4|AAU20835.1|  484|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4c protein.
          Length = 484

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 28/66 (42%), Positives = 46/66 (69%)
 Frame = +2

Query: 158 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 337
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 14  VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 70

Query: 338 EPTVKS 355
           +  +K+
Sbjct: 71  KDLLKA 76


>AC006762-3|AAU20834.1|  614|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4b protein.
          Length = 614

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 28/66 (42%), Positives = 46/66 (69%)
 Frame = +2

Query: 158 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 337
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 144 VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 200

Query: 338 EPTVKS 355
           +  +K+
Sbjct: 201 KDLLKA 206


>AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4a protein.
          Length = 607

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 28/66 (42%), Positives = 46/66 (69%)
 Frame = +2

Query: 158 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 337
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 44  VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 100

Query: 338 EPTVKS 355
           +  +K+
Sbjct: 101 KDLLKA 106


>AC006762-1|AAU87813.1|  514|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4d protein.
          Length = 514

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 28/66 (42%), Positives = 46/66 (69%)
 Frame = +2

Query: 158 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 337
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 44  VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 100

Query: 338 EPTVKS 355
           +  +K+
Sbjct: 101 KDLLKA 106


>AF078787-4|AAC26952.2|  274|Caenorhabditis elegans Hypothetical
           protein T17A3.6 protein.
          Length = 274

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = +3

Query: 306 RAWIYRRPFHWSRQSKVCSI----LNWHQGITGKFSWRLPHKIDHDYHLRRVEEYLHLIK 473
           + + ++ P    R   VCSI    L +H+ I  K+S R  +K+  DYH  + +E+  ++ 
Sbjct: 85  KVFYWKPPGFTFRTVHVCSIFMEDLKFHRDILMKYS-RQFNKLTLDYHSLKSQEFHSILS 143

Query: 474 PNFDSLPNNQKNSLRSFL 527
            N+D     +   L   L
Sbjct: 144 LNYDRFCLEKATKLEDLL 161


>Z81570-5|CAB04605.2|  321|Caenorhabditis elegans Hypothetical
           protein K12G11.5 protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +3

Query: 543 IFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALIQLLKLKS 686
           I+ S YL   SMD+S G  + +GA     A FA  +    I L  LKS
Sbjct: 163 IYSSQYLMFSSMDVSGGGIVIMGALMFGIALFANLMTFIRISLFYLKS 210


>Z70037-1|CAA93878.1|  493|Caenorhabditis elegans Hypothetical
           protein T27D12.1 protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -2

Query: 450 PPFASDSHGRFCGVISKRICRLSPGASLG-WNRLLTVGSNGMV 325
           PPF   S    CG  S R+  LS G     +N L  VGS G +
Sbjct: 306 PPFLQFSSKLICGAASDRLTCLSEGVKFRLFNTLAFVGSAGFL 348


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 21/62 (33%), Positives = 34/62 (54%)
 Frame = +1

Query: 340 ADSQKSVPS*TGTRG*PANSLGDYPTKSTMTITCEGWRNTCI*SSLTLTRCPTIKRIPCV 519
           + S  S P+ T T G P+++LG   + S+  ++     +T   S+LTL++ PT    P V
Sbjct: 410 SSSPNSTPTTTITPGAPSSTLG---SSSSTIVSTTITPSTPKVSTLTLSQSPTPTSTPLV 466

Query: 520 VS 525
           VS
Sbjct: 467 VS 468


>AC006762-8|AAP31426.1|  295|Caenorhabditis elegans Hypothetical
           protein Y42G9A.3b protein.
          Length = 295

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 426 HDYHLRRVEEYLHLIKPNFDSLPNNQK--NSLRSFLYVFSGIFGSTYLPVKSMDISMGSE 599
           HDY L  +    H+ +P  D  P N K  +   +   +  G+  +T+  V  +D+S  S 
Sbjct: 38  HDYGLEEIPMRYHIEQPEEDYDPQNVKKLDLTHNSFVILRGL--TTFNNVSVLDVSFNSL 95

Query: 600 LTIGAGTGSSASFAVCLA 653
             +    G+ +S    +A
Sbjct: 96  SALPEDIGTLSSLTTLIA 113


>AC006762-7|AAF60555.1|  375|Caenorhabditis elegans Hypothetical
           protein Y42G9A.3a protein.
          Length = 375

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 426 HDYHLRRVEEYLHLIKPNFDSLPNNQK--NSLRSFLYVFSGIFGSTYLPVKSMDISMGSE 599
           HDY L  +    H+ +P  D  P N K  +   +   +  G+  +T+  V  +D+S  S 
Sbjct: 38  HDYGLEEIPMRYHIEQPEEDYDPQNVKKLDLTHNSFVILRGL--TTFNNVSVLDVSFNSL 95

Query: 600 LTIGAGTGSSASFAVCLA 653
             +    G+ +S    +A
Sbjct: 96  SALPEDIGTLSSLTTLIA 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,435,730
Number of Sequences: 27780
Number of extensions: 438916
Number of successful extensions: 1408
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)