Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_I11
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 77 2e-14
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 75 6e-14
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 71 1e-12
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 70 2e-12
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 70 2e-12
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 31 1.4
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 31 1.4
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical pr... 29 4.1
U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine rece... 29 4.1
AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein. 29 4.1
AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP ... 29 4.1
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 29 4.1
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 28 7.2
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +2
Query: 125 HFXAFMQPIGVGLXTRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+F +M+ +GVGL TRKAA + PT+E++ +GD + STFK T + FK G+EF+E
Sbjct: 16 NFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFKLGQEFDETT 75
Query: 305 ADGAKVKSVCTFEGNTLKQVQK 370
DG VKSV FE +QK
Sbjct: 76 PDGRTVKSVVNFENGKFIHIQK 97
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 74.9 bits (176), Expect = 6e-14
Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Frame = +2
Query: 125 HFXAFMQPIGVGLXTRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+F +M+ IGVGL TRKAA + P +E+R DG+ +N STFK T++ FK GEEF E+
Sbjct: 18 NFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTKLSFKLGEEFVENS 77
Query: 305 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMT--AKDVTCTRVYK 472
D S+ TFE L Q + V E K + T + DV C R ++
Sbjct: 78 PDDRTYNSLFTFENGKLTHRQNKIKENHKSSVLTTWLENGKLIQTYQSGDVICRREWE 135
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 70.5 bits (165), Expect = 1e-12
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Frame = +2
Query: 125 HFXAFMQPIGVGLXTRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+F +++ +GVGL RKAA A PT+E++ +G+++++ STFK T ++F G EF+E
Sbjct: 17 NFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTLEFTLGVEFDETT 76
Query: 305 ADGAKVKSVCTFEGNTLKQVQK--APDGLEVTYVREFGPEEMKAVMTAKDVTCTRVY 469
DG + KS T E + VQK + R F E++ + + V R Y
Sbjct: 77 PDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITTLQSGSVISRRAY 133
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 69.7 bits (163), Expect = 2e-12
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 125 HFXAFMQPIGVGLXTRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+F +++ +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 18 NFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKT 77
Query: 305 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 472
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 78 ADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 134
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 69.7 bits (163), Expect = 2e-12
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 125 HFXAFMQPIGVGLXTRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+F +++ +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 33 NFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKT 92
Query: 305 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 472
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 93 ADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 149
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 61.3 bits (142), Expect = 8e-10
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = +2
Query: 125 HFXAFMQPIGVGLXTRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+F +++ IGVGL RKAA+ +PT+E++ DGD ++ STFK ++ FK E+F E
Sbjct: 18 NFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNKLAFKIREKFVEIA 77
Query: 305 ADGAKVKSVCTFE 343
D ++ TFE
Sbjct: 78 PDERSYNTLVTFE 90
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +2
Query: 149 IGVGLXTRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 280
IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 13 IGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +2
Query: 149 IGVGLXTRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 280
IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 13 IGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +2
Query: 149 IGVGLXTRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 280
IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 13 IGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical protein
C05C12.3 protein.
Length = 1694
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +3
Query: 48 SLQSLKFISQNWHSSASQSNLPSSVVTLXRSCSPSAWVXSPAKPPTLSPRPWSSVRMVTN 227
SLQ+ K I++N SS Q +PS L SA + + P P VR VT
Sbjct: 1552 SLQAKKKITENRRSSLEQPKIPSIQFNLMEDQDESAAESATEEVSISIPVPQMRVRQVTE 1611
Query: 228 T 230
+
Sbjct: 1612 S 1612
>U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform c protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 515 ADSRTSRGTIMFI*HLFYTLALSSFFVKLILVFTSVIVCRSNC 643
ADS + G I+F HLF+ + S F L+ + T + V +C
Sbjct: 51 ADSLHNYGQIIFTAHLFFDIQTSHFVCTLLNIPTLIGVISGSC 93
>AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein.
Length = 1694
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +3
Query: 48 SLQSLKFISQNWHSSASQSNLPSSVVTLXRSCSPSAWVXSPAKPPTLSPRPWSSVRMVTN 227
SLQ+ K I++N SS Q +PS L SA + + P P VR VT
Sbjct: 1552 SLQAKKKITENRRSSLEQPKIPSIQFNLMEDQDESAAESATEEVSISIPVPQMRVRQVTE 1611
Query: 228 T 230
+
Sbjct: 1612 S 1612
>AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1681
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +3
Query: 48 SLQSLKFISQNWHSSASQSNLPSSVVTLXRSCSPSAWVXSPAKPPTLSPRPWSSVRMVTN 227
SLQ+ K I++N SS Q +PS L SA + + P P VR VT
Sbjct: 1539 SLQAKKKITENRRSSLEQPKIPSIQFNLMEDQDESAAESATEEVSISIPVPQMRVRQVTE 1598
Query: 228 T 230
+
Sbjct: 1599 S 1599
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 170 RKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE 298
+ A + TP D+ + T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +2
Query: 74 SKLAFVGKSIQSAFLRXHF---XAFMQPIGVGLXTRKAANAVTPTVELRKDGDEYNLVTS 244
S A GKSI S FL HF + P ++ ++ + E R+DG+ + +
Sbjct: 128 SGTASKGKSIGSLFLSFHFMPSSSDNSPSDSTADLQQTSSGMPQGWEEREDGNGRTVYVN 187
Query: 245 STFKTTEMKFKPGEEFEEDRADGAKVKSV 331
+TT+ F P E D +SV
Sbjct: 188 HALRTTQ--FTPPESVSNGNVDAITEQSV 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,260,775
Number of Sequences: 27780
Number of extensions: 365834
Number of successful extensions: 1053
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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