Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_I10
(838 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32305-3|AAK18862.2| 201|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U32305-2|AAZ82852.1| 204|Caenorhabditis elegans Hypothetical pr... 61 8e-10
Z68108-1|CAA92134.1| 194|Caenorhabditis elegans Hypothetical pr... 33 0.19
U39849-1|AAA81045.2| 332|Caenorhabditis elegans Serpentine rece... 31 0.77
Z74030-13|CAA98445.2| 336|Caenorhabditis elegans Hypothetical p... 31 1.3
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 29 4.1
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 29 4.1
Z92786-7|CAB07209.1| 145|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF440508-1|AAL34096.1| 144|Caenorhabditis elegans SKR-5 protein. 29 5.4
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 28 7.2
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 28 7.2
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical... 28 7.2
Z81115-3|CAB03293.2| 486|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z70687-3|CAM35839.1| 332|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical pr... 28 9.5
U41279-15|AAK31417.2| 316|Caenorhabditis elegans Hypothetical p... 28 9.5
AL132943-2|CAC14392.1| 367|Caenorhabditis elegans Hypothetical ... 28 9.5
AF026206-6|AAK39305.3| 167|Caenorhabditis elegans Hypothetical ... 28 9.5
>U32305-3|AAK18862.2| 201|Caenorhabditis elegans Hypothetical
protein B0336.5a protein.
Length = 201
Score = 61.3 bits (142), Expect = 8e-10
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = +2
Query: 287 RFL-DNFDPKNSARERRKANRKKYFTSRKVKRIYDDHGHIAETGK------DLCDCLDEK 445
RFL D+ D ++ R +R A K+ R +D G ++ T K DLCDCL +
Sbjct: 86 RFLPDSVDIISTNRSKRVAAEKQA-DLRDEPLHHDKTGKLSVTAKGQTLFFDLCDCLVVE 144
Query: 446 CPGCHFPCANCNSNKCGHECRINRKWMYDKIE 541
C GCH+PC C S KC CR NRK M ++E
Sbjct: 145 CDGCHWPCKQCKSRKCLIGCRQNRKEMVIRVE 176
>U32305-2|AAZ82852.1| 204|Caenorhabditis elegans Hypothetical
protein B0336.5b protein.
Length = 204
Score = 61.3 bits (142), Expect = 8e-10
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Frame = +2
Query: 287 RFL-DNFDPKNSARERRKANRKKYFTSRKVKRIYDDHGHIAETGK------DLCDCLDEK 445
RFL D+ D ++ R +R A K+ R +D G ++ T K DLCDCL +
Sbjct: 89 RFLPDSVDIISTNRSKRVAAEKQA-DLRDEPLHHDKTGKLSVTAKGQTLFFDLCDCLVVE 147
Query: 446 CPGCHFPCANCNSNKCGHECRINRKWMYDKIE 541
C GCH+PC C S KC CR NRK M ++E
Sbjct: 148 CDGCHWPCKQCKSRKCLIGCRQNRKEMVIRVE 179
>Z68108-1|CAA92134.1| 194|Caenorhabditis elegans Hypothetical
protein T05A10.2 protein.
Length = 194
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = -1
Query: 658 EVEYFFKLVAND*ICFIIILYFQLLVFVIIFYNKIISFYFNFVIHPFSVNSALMATFIGI 479
E++ + K+VA IC I L +++ FV F + +++HP S S L+ F+ +
Sbjct: 73 EMKPYEKIVA---ICMIAALILEIVAFVWNFLTSCTCCFKKYLLHPLSPLSFLITIFLTV 129
Query: 478 AV 473
A+
Sbjct: 130 AI 131
>U39849-1|AAA81045.2| 332|Caenorhabditis elegans Serpentine
receptor, class h protein39 protein.
Length = 332
Score = 31.5 bits (68), Expect = 0.77
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = -1
Query: 649 YFFKLVAND*ICFIIILYFQLLVFVIIFYNKIISFYFNFVIHPFSVNSALMATFIGIAVC 470
+ FK V+N + ++L+ +++ +IF+ SFYF F I ++SA +
Sbjct: 184 FSFKPVSNTMLITTVLLFSLVILIQVIFFTGF-SFYFLFSIERSKMSSATRKLQLKFFYT 242
Query: 469 TWKMASRTLLIEAITQVFASFS 404
TW L + + + FS
Sbjct: 243 TWLQMLTHLAVIILPMGYTFFS 264
>Z74030-13|CAA98445.2| 336|Caenorhabditis elegans Hypothetical
protein D1054.12 protein.
Length = 336
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = -1
Query: 724 LYGKSIVHNAVHCTDLPEDGELEVEYFFKLVAND*ICFIIILYFQLLVFVIIFYNKIISF 545
L G++ V + C +P+D YF + N C +I F L++ +++ I +
Sbjct: 163 LQGRATVQQEIPC--IPKDVINRPGYFVLSIVNTIPCLCLIFMFSLIIPQALYFVLSIFW 220
Query: 544 YFNFVIHPFSVNSALMATFIGIAVC 470
Y + V + L F A+C
Sbjct: 221 YLYHTVSKSQVTNRLQKQFF-FALC 244
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 431 CLDEKCPGCHFPCANCNSNKC 493
CLD+KC G +CN+ KC
Sbjct: 831 CLDDKCDGDDLEKESCNTQKC 851
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 431 CLDEKCPGCHFPCANCNSNKC 493
CLD+KC G +CN+ KC
Sbjct: 831 CLDDKCDGDDLEKESCNTQKC 851
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 431 CLDEKCPGCHFPCANCNSNKC 493
CLD+KC G +CN+ KC
Sbjct: 831 CLDDKCDGDDLEKESCNTQKC 851
>Z92786-7|CAB07209.1| 145|Caenorhabditis elegans Hypothetical
protein F47H4.10 protein.
Length = 145
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 37 FQLALSASHRRVGALTRSTCVAFAHTRPHKNRRSIRSIFHRXN 165
F+L L+A++ + L TC + A++ K+ IR++F+ N
Sbjct: 98 FELVLAATYLDIKGLFNVTCKSIANSIKGKSPEEIRAVFNLGN 140
>AF440508-1|AAL34096.1| 144|Caenorhabditis elegans SKR-5 protein.
Length = 144
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 37 FQLALSASHRRVGALTRSTCVAFAHTRPHKNRRSIRSIFHRXN 165
F+L L+A++ + L TC + A++ K+ IR++F+ N
Sbjct: 97 FELVLAATYLDIKGLFNVTCKSIANSIKGKSPEEIRAVFNLGN 139
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -1
Query: 376 LHFSRSEIFFPVCFSTFTS*IFRIKII*ETHLLKSTYYKHKIILKKY 236
+ F+R +IF P CFS F ++++ +I + L++ + H + K+
Sbjct: 128 IFFNRFKIFIPECFSEF---VYQLSLIEDAMTLRANEHVHILRENKF 171
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -1
Query: 376 LHFSRSEIFFPVCFSTFTS*IFRIKII*ETHLLKSTYYKHKIILKKY 236
+ F+R +IF P CFS F ++++ +I + L++ + H + K+
Sbjct: 128 IFFNRFKIFIPECFSEF---VYQLSLIEDAMTLRANEHVHILRENKF 171
>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
protein Y47G6A.29 protein.
Length = 2460
Score = 28.3 bits (60), Expect = 7.2
Identities = 8/31 (25%), Positives = 20/31 (64%)
Frame = -1
Query: 610 IIILYFQLLVFVIIFYNKIISFYFNFVIHPF 518
++ L+ FV++F++++ + +F FVI +
Sbjct: 28 VVTLFLAWSTFVVLFFSRVSALFFTFVIDKY 58
>Z81115-3|CAB03293.2| 486|Caenorhabditis elegans Hypothetical
protein T05D4.3 protein.
Length = 486
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = -1
Query: 574 IIFYNKIISFYFNFVIHPFSVNSALMATFIGIAVCTWKMASRTLLIEAITQVF 416
I+F +I F+ ++ + + ++A IG +C ++S E I+ +F
Sbjct: 355 IVFVFVVIVAIFSLIVATQNCSQMMLAAIIGQGICILSISSELFTSERISAIF 407
>Z70687-3|CAM35839.1| 332|Caenorhabditis elegans Hypothetical
protein T14C1.3 protein.
Length = 332
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +2
Query: 383 YDDHGHIAETGKDLCDCLDEKCPGCHFPCANCNS-NKCGHECRINRKW------MYDKIE 541
+D H I +++ D L E+ C F NC N+ C + +++ MYDKIE
Sbjct: 8 FDFHFRIDTNDRNIMD-LPEELQKCIFSNLNCTDFNRLRRVCVLFKEYVDAGEPMYDKIE 66
Query: 542 IE 547
IE
Sbjct: 67 IE 68
>Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical
protein F11A10.3 protein.
Length = 522
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +2
Query: 299 NFDPKNSARERRKANRKKYFTSRKVKRIYDD---HGHIAETGKDLCDCLDEKCPGCHFPC 469
NF P +S +RR+ YF K + +D G+I + + DC+ C C
Sbjct: 274 NFGPISSINQRRRDEMMAYFP--KANFLAEDGVPKGYIVD-ATTIIDCMHTFCKSCLLTY 330
Query: 470 ANCNSNKC 493
++N C
Sbjct: 331 FESDNNTC 338
>U41279-15|AAK31417.2| 316|Caenorhabditis elegans Hypothetical
protein C17C3.3 protein.
Length = 316
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -1
Query: 742 PESIRALYGKSIVHN--AVHCTDLPEDGELEVEYFFKLVAND*ICFIIILYFQL 587
P SI A + +++++ A++ +DG+ + + V ND ICF++ + F +
Sbjct: 62 PNSIHAYFVSAVIYSTPAIYKVKRIKDGKTFIIRTVEAVQNDRICFVLQVSFHI 115
>AL132943-2|CAC14392.1| 367|Caenorhabditis elegans Hypothetical
protein Y116F11B.5 protein.
Length = 367
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -1
Query: 619 ICFIIILYFQLLVFVIIFYNKIISFYFNFVIHPFSVNSALMATF 488
+C II + ++ F + YN SF +F PF+ S +++ +
Sbjct: 75 LCGIIHMICNIIEFCPLLYNYYFSFEISFECFPFASYSKIVSNY 118
>AF026206-6|AAK39305.3| 167|Caenorhabditis elegans Hypothetical
protein T28B4.4 protein.
Length = 167
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 607 IILYFQLLVFVIIFYNKIISFYFNFVI 527
+I++ LL+ +I+F I SFY+N +I
Sbjct: 103 LIIFILLLISIIVFAANIGSFYYNALI 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,729,755
Number of Sequences: 27780
Number of extensions: 303070
Number of successful extensions: 1097
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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