Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_I09
         (539 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6IDF5 Cluster: RE22403p; n=6; Endopterygota|Rep: RE224...    54   2e-06
UniRef50_Q86FD0 Cluster: Clone ZZD251 mRNA sequence; n=2; Schist...    36   0.60 
UniRef50_UPI000023E4DA Cluster: hypothetical protein FG07149.1; ...    33   4.2  
UniRef50_Q54CX6 Cluster: 3-hydroxyisobutyrate dehydrogenase; n=3...    33   5.6  
UniRef50_O83114 Cluster: Sugar ABC transporter, permease protein...    32   7.3  
UniRef50_Q22A79 Cluster: Putative uncharacterized protein; n=1; ...    32   9.7  

>UniRef50_Q6IDF5 Cluster: RE22403p; n=6; Endopterygota|Rep: RE22403p
           - Drosophila melanogaster (Fruit fly)
          Length = 113

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
 Frame = +1

Query: 160 EMXRXFLKQXTNPWKNAS-EAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVP 336
           ++ + FLKQ +NP+++A+ E G VFD  L RF +M+V+ +E+F    ++   G F +V+P
Sbjct: 20  KLRQEFLKQSSNPYRHATGEGGTVFDAGLARFQAMRVSNYEHFKPTGKSFRTGLFAVVLP 79

Query: 337 MFTFGTLIWNER 372
           +  +   +  ER
Sbjct: 80  IALYAWALKAER 91


>UniRef50_Q86FD0 Cluster: Clone ZZD251 mRNA sequence; n=2;
           Schistosoma japonicum|Rep: Clone ZZD251 mRNA sequence -
           Schistosoma japonicum (Blood fluke)
          Length = 125

 Score = 35.9 bits (79), Expect = 0.60
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +1

Query: 136 KTQASRRAEMXRXFLKQXTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLF- 312
           K +A  R  M   + K+ TNP+K     G+V D ALQR  S +VT  E+   + +  L  
Sbjct: 26  KERAKIRDAMKAEYRKRYTNPFK--PPLGFVHDPALQRQFSAQVTFAEFLRPSPKLGLIA 83

Query: 313 -GFF 321
            GFF
Sbjct: 84  AGFF 87


>UniRef50_UPI000023E4DA Cluster: hypothetical protein FG07149.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG07149.1 - Gibberella zeae PH-1
          Length = 278

 Score = 33.1 bits (72), Expect = 4.2
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +1

Query: 4   PAAAVSANRSIPSRFXSXXPLQFGHCLVNLAXHSGFSAAXLNLXKTQAS 150
           P+A+ SA R + S F     + FGHCL     H    AA   + +++AS
Sbjct: 27  PSASSSATRRVVSSFGPQSKIDFGHCLYR---HESTEAASSYIIRSEAS 72


>UniRef50_Q54CX6 Cluster: 3-hydroxyisobutyrate dehydrogenase; n=3;
           cellular organisms|Rep: 3-hydroxyisobutyrate
           dehydrogenase - Dictyostelium discoideum AX4
          Length = 321

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -1

Query: 344 VNMGTTITKNPNKLVRLFTVKYSNCVTFMDRNLCNAVSKT*PASEAFFQGF 192
           +N+G     +P KL  +F    + C T    N C  V +T PAS  +  GF
Sbjct: 210 MNLGVKQGMDPKKLAGIFNTSSARCWTSELYNPCPGVIETSPASRGYTGGF 260


>UniRef50_O83114 Cluster: Sugar ABC transporter, permease protein;
           n=1; Treponema pallidum|Rep: Sugar ABC transporter,
           permease protein - Treponema pallidum
          Length = 296

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 11  LQSLQIGPFHLVFXPHXRFNSVIALSIWQXTPASLLXHSTXLKPKPQGVLKXA 169
           LQ+ ++GP   +  P     SVI   +WQ TP   L     L+  PQ +L  A
Sbjct: 143 LQAFELGPVLWLANPRLALLSVILTDVWQWTPFVFLVLLAGLQGIPQHLLYAA 195


>UniRef50_Q22A79 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1157

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 351  TKCKHGYNNNKKSKQTSSLVYGKIFKLCYFHGQ-KPLQCCVENITSLRSV 205
            T C+ GY  +  ++Q   L+ GK  + CYF  Q   +QC   N  +L ++
Sbjct: 922  TSCQSGYFLDANTQQCVKLICGKYCQSCYFDQQNNKIQCSYCNTDALSNL 971


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,045,500
Number of Sequences: 1657284
Number of extensions: 6404305
Number of successful extensions: 14579
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14577
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)