Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_I09
         (539 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81050-4|CAB02854.1|  329|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z74044-1|CAA98550.1|  548|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z74039-11|CAA98508.1|  548|Caenorhabditis elegans Hypothetical p...    28   4.9  
AF077307-1|AAC98095.1|  548|Caenorhabditis elegans acetyl cholin...    28   4.9  
Z81524-7|CAD54142.2|  597|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z81050-15|CAN86587.1|  597|Caenorhabditis elegans Hypothetical p...    27   6.5  

>Z81050-4|CAB02854.1|  329|Caenorhabditis elegans Hypothetical
           protein C50B6.5 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 274 FEYFTVNKRTSLFGFFVIVVPMFTFGTLIWNERSVC 381
           F+++T+N      G+ +I + MF F    +N +S C
Sbjct: 92  FQFYTINALIHQTGYSIIEMYMFRFKASTYNFQSTC 127


>Z74044-1|CAA98550.1|  548|Caenorhabditis elegans Hypothetical
           protein T26H10.1 protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 14/65 (21%), Positives = 26/65 (40%)
 Frame = +1

Query: 157 AEMXRXFLKQXTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVP 336
           +E+   FL     P            ++++    + V +FE+F      + F  FV+   
Sbjct: 466 SELSSKFLTSRMRPKSQKDNTFAAMQSSIKANRQLAVAEFEWFATVVERTCFVIFVVAFL 525

Query: 337 MFTFG 351
           + TFG
Sbjct: 526 IITFG 530


>Z74039-11|CAA98508.1|  548|Caenorhabditis elegans Hypothetical
           protein T26H10.1 protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 14/65 (21%), Positives = 26/65 (40%)
 Frame = +1

Query: 157 AEMXRXFLKQXTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVP 336
           +E+   FL     P            ++++    + V +FE+F      + F  FV+   
Sbjct: 466 SELSSKFLTSRMRPKSQKDNTFAAMQSSIKANRQLAVAEFEWFATVVERTCFVIFVVAFL 525

Query: 337 MFTFG 351
           + TFG
Sbjct: 526 IITFG 530


>AF077307-1|AAC98095.1|  548|Caenorhabditis elegans acetyl choline
           receptor alpha subunitDES-2 protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 14/65 (21%), Positives = 26/65 (40%)
 Frame = +1

Query: 157 AEMXRXFLKQXTNPWKNASEAGYVFDTALQRFLSMKVTQFEYFTVNKRTSLFGFFVIVVP 336
           +E+   FL     P            ++++    + V +FE+F      + F  FV+   
Sbjct: 466 SELSSKFLTSRMRPKSQKDNTFAAMQSSIKANRQLAVAEFEWFATVVERTCFVIFVVAFL 525

Query: 337 MFTFG 351
           + TFG
Sbjct: 526 IITFG 530


>Z81524-7|CAD54142.2|  597|Caenorhabditis elegans Hypothetical
           protein F32H5.7 protein.
          Length = 597

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 280 IQTVLLSWTETFAMLCRK 227
           + T+L SWT  F +LCRK
Sbjct: 218 LATLLKSWTRPFLLLCRK 235


>Z81050-15|CAN86587.1|  597|Caenorhabditis elegans Hypothetical
           protein F32H5.7 protein.
          Length = 597

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 280 IQTVLLSWTETFAMLCRK 227
           + T+L SWT  F +LCRK
Sbjct: 218 LATLLKSWTRPFLLLCRK 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,253,384
Number of Sequences: 27780
Number of extensions: 160092
Number of successful extensions: 421
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)