Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_I04
         (599 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486...    30   1.2  
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046...    29   2.2  
03_01_0175 - 1413599-1413934,1414326-1414526,1414660-1414962           29   2.8  
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657...    29   3.8  
09_02_0454 + 9514706-9515776                                           28   6.6  
08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,438...    27   8.7  
07_03_0762 + 21324550-21325414,21325606-21325746,21325993-213261...    27   8.7  

>03_05_0944 + 29046793-29046922,29048091-29048464,29048556-29048687,
            29048829-29049210,29049370-29049513,29049593-29049777,
            29049925-29050051,29050603-29050676,29051071-29051147,
            29051256-29051292,29051453-29051619,29051800-29051983,
            29052053-29052130,29052451-29052570,29052648-29052707,
            29053057-29053179,29053848-29053941,29054019-29054197,
            29054737-29055039,29055373-29055474,29055553-29055693,
            29055831-29055995,29056168-29056344,29056432-29056554,
            29057787-29057867,29057983-29058099,29058214-29058386,
            29058846-29058923,29058994-29059141,29059755-29059877,
            29060015-29060071,29060145-29060255,29060382-29060573,
            29060690-29060863,29061263-29061373,29061462-29061531,
            29061734-29061812,29061898-29062000,29062086-29062256,
            29062348-29062470,29062548-29062661,29062935-29063041,
            29063117-29063168,29063245-29063351,29063589-29063703,
            29063819-29063929,29064016-29064153,29064230-29064352,
            29064535-29064606,29064774-29064886,29066780-29067110,
            29067199-29067381,29068669-29068863,29068943-29069110,
            29069208-29069340,29069511-29069595,29069726-29069765
          Length = 2591

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
 Frame = -3

Query: 360  MVSSLVSEVRNGFGFAVSVR---VTVASSHSNNNVRLVVV--VESLLQLTSFATYDAVGS 196
            +V+ L  E+ + FGF V      +  A SH N NVR      + + L        D + +
Sbjct: 1072 VVAELAEELWDRFGFDVFTDYSGIFDALSHKNYNVRAAAAEALAAALDENLDKMQDTLST 1131

Query: 195  LEIVVVSSIGAGVEF 151
            L  + +  +GAGVEF
Sbjct: 1132 LFSLYIRDLGAGVEF 1146


>12_02_0477 +
           19503678-19503803,19504381-19504422,19504631-19504684,
           19504946-19505068,19505154-19505210,19505299-19505373,
           19505925-19506026
          Length = 192

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -3

Query: 462 PHNPVLRLHYLNLSRE-FRSLARGGGDLRNRFTLSMVSSLVSEVRNGFGFAVSVRVTVAS 286
           PH        +++S + F SL    G+ ++   L    +L+S++++GFG    + VTV S
Sbjct: 117 PHVNRTEYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMS 176

Query: 285 SHSNNNV 265
           +     +
Sbjct: 177 AMGEEQI 183


>03_01_0175 - 1413599-1413934,1414326-1414526,1414660-1414962
          Length = 279

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 290 ATVTRTLTANPKPLRTSLTRLDTMLRVNLFLRSPPPRAKL 409
           A    TL ++P P   + T   +   V L LRSPPPR  L
Sbjct: 2   AATAVTLPSSPAPFPVTTTASSSR-NVRLLLRSPPPRRAL 40


>07_03_1141 -
           24264534-24264635,24265542-24265616,24265709-24265765,
           24265903-24266025,24266509-24266520,24267014-24267157,
           24267606-24267626
          Length = 177

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -3

Query: 462 PHNPVLRLHYLNLSRE-FRSLARGGGDLRNRFTLSMVSSLVSEVRNGFGFAVSVRVTVAS 286
           PH        +++S + F SL    G+ ++   L    SL+ +++ GFG    + VTV S
Sbjct: 102 PHVNRTEYQLIDISEDGFVSLLTESGNTKDDLRLPTDDSLLGQIKTGFGEGKDLVVTVMS 161

Query: 285 SHSNNNV 265
           +     +
Sbjct: 162 AMGEEQI 168


>09_02_0454 + 9514706-9515776
          Length = 356

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -3

Query: 210 DAVGSLEIVVVSSIGAGVEFRPNDLRVVLCRGGS 109
           D VGS  +V V      V     D R VLCRGG+
Sbjct: 187 DHVGSTAVVAVVEESRVVVANCGDSRAVLCRGGA 220


>08_01_0505 -
           4379722-4380795,4380868-4381008,4381099-4381270,
           4381944-4382047,4382127-4382259,4384477-4384653,
           4385164-4385309,4385536-4385625,4385703-4385915,
           4386090-4386182,4386743-4386937,4387018-4387110,
           4387924-4388019,4388556-4388985,4389424-4390091,
           4392074-4392271,4392690-4393407,4394036-4394181
          Length = 1628

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 22/77 (28%), Positives = 33/77 (42%)
 Frame = -3

Query: 468 ASPHNPVLRLHYLNLSREFRSLARGGGDLRNRFTLSMVSSLVSEVRNGFGFAVSVRVTVA 289
           AS H P  +   +N   + R L  GG + RN+   +   S   +V N  G A   + T  
Sbjct: 548 ASKHCPDAKYMNVNSDNQIRQLFFGGIENRNKRGETWPQSKTFKVPNDEGIATEGKKTPK 607

Query: 288 SSHSNNNVRLVVVVESL 238
           S      ++L  +VE L
Sbjct: 608 S----RTIKLFTIVEDL 620


>07_03_0762 +
           21324550-21325414,21325606-21325746,21325993-21326177,
           21326200-21326410,21326526-21326769,21326853-21327003,
           21327089-21327439
          Length = 715

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 20/62 (32%), Positives = 27/62 (43%)
 Frame = -3

Query: 357 VSSLVSEVRNGFGFAVSVRVTVASSHSNNNVRLVVVVESLLQLTSFATYDAVGSLEIVVV 178
           V  L    R G G   S  + VA  +  N VRL+ V     +      Y   GSL+IV+ 
Sbjct: 408 VKRLCQSSRQGIGELKSELILVAKLYHKNLVRLIGVCLEQQEKILVYEYMPNGSLDIVLF 467

Query: 177 SS 172
           +S
Sbjct: 468 AS 469


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,471,650
Number of Sequences: 37544
Number of extensions: 312457
Number of successful extensions: 804
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)