Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_I02
(833 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 144 7e-35
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 144 7e-35
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 139 3e-33
U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily ass... 95 7e-20
AC024777-1|AAF60563.1| 133|Caenorhabditis elegans Hypothetical ... 83 2e-16
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 37 0.020
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 36 0.036
U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid precur... 33 0.19
U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid precurs... 33 0.19
U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid pr... 33 0.19
U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical pr... 33 0.33
AL132948-21|CAC51051.2| 453|Caenorhabditis elegans Hypothetical... 31 1.0
U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synapti... 31 1.3
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti... 31 1.3
AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein. 31 1.3
U58760-9|AAK31465.1| 654|Caenorhabditis elegans Dishevelled rel... 30 1.8
U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical pr... 30 2.3
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 29 3.1
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 29 3.1
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical p... 29 5.4
Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical pr... 29 5.4
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 28 7.2
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 28 7.2
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 28 7.2
AF408759-1|AAO27838.1| 279|Caenorhabditis elegans LIN-36 protein. 28 7.2
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 28 7.2
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 28 7.2
Z83218-3|CAB05688.1| 330|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF039710-5|AAB96689.2| 394|Caenorhabditis elegans Hypothetical ... 28 9.5
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 144 bits (349), Expect = 7e-35
Identities = 75/210 (35%), Positives = 121/210 (57%), Gaps = 4/210 (1%)
Frame = +3
Query: 150 DGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVA 329
DG+ F F++K++R AF+RKV++++ L + + H T V +N ++ +
Sbjct: 67 DGKYS-FQFSDKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGS 125
Query: 330 FIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYEADAVLMAVGITAA 509
+++ V +++ CC VRRK P N I IFT A S + + ++ ++A+ VL+A+ I
Sbjct: 126 YVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVMTMVISAHHDANVVLLALAICIG 185
Query: 510 VCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAI----FVKGKVITLVYASLGALI 677
+ + A QTK+D T G +L ++ + FG+V + F K K + +VYA GALI
Sbjct: 186 CTFSIVIVASQTKFDLTAHMGYILIISMCFMFFGLVVVICSMFFKIKFLMMVYALGGALI 245
Query: 678 FSIYLVYDTXLMMGGKHKYSISPEEYIFAA 767
+YL D ++MGGK KY ISPEEYIFA+
Sbjct: 246 MMLYLFLDVQMLMGGK-KYEISPEEYIFAS 274
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 144 bits (349), Expect = 7e-35
Identities = 75/210 (35%), Positives = 121/210 (57%), Gaps = 4/210 (1%)
Frame = +3
Query: 150 DGEVKGFDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVA 329
DG+ F F++K++R AF+RKV++++ L + + H T V +N ++ +
Sbjct: 67 DGKYS-FQFSDKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGS 125
Query: 330 FIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYEADAVLMAVGITAA 509
+++ V +++ CC VRRK P N I IFT A S + + ++ ++A+ VL+A+ I
Sbjct: 126 YVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVMTMVISAHHDANVVLLALAICIG 185
Query: 510 VCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVAI----FVKGKVITLVYASLGALI 677
+ + A QTK+D T G +L ++ + FG+V + F K K + +VYA GALI
Sbjct: 186 CTFSIVIVASQTKFDLTAHMGYILIISMCFMFFGLVVVICSMFFKIKFLMMVYALGGALI 245
Query: 678 FSIYLVYDTXLMMGGKHKYSISPEEYIFAA 767
+YL D ++MGGK KY ISPEEYIFA+
Sbjct: 246 MMLYLFLDVQMLMGGK-KYEISPEEYIFAS 274
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 139 bits (336), Expect = 3e-33
Identities = 72/203 (35%), Positives = 119/203 (58%), Gaps = 5/203 (2%)
Frame = +3
Query: 174 FTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCL 353
F+ +++R AF+RKV+ ++ +T F + + P + WV N +++++A IV +V
Sbjct: 22 FSSQTVRAAFVRKVFMLVTIMFAITAAFCVIPMVSEPFQDWVKNNFWVYFIAIIVFLVVA 81
Query: 354 IAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYEADAVLMAVGITAAVCLG-LTL 530
IA++CC ++RR+ P N I L IFT + + + + Y +VL+ + IT VC G + +
Sbjct: 82 IALSCCGNLRRQFPVNIILLTIFTLSAAVMTMFVTACYNVQSVLICLCIT-TVCSGSVII 140
Query: 531 FALQTKWDFTMMGGVLLCATIVLLVFGIVAIF----VKGKVITLVYASLGALIFSIYLVY 698
F+++TK D T G+ ++VL FGI A+ + + VY+ L AL+ YL
Sbjct: 141 FSMKTKSDLTSKMGIAFMLSMVLFSFGIFALIFTLAFNWQFLYSVYSGLAALLMMFYLAI 200
Query: 699 DTXLMMGGKHKYSISPEEYIFAA 767
D L+MGG+ KY +SPE+YIFAA
Sbjct: 201 DVQLLMGGR-KYELSPEDYIFAA 222
>U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily
assigned gene nameprotein 132 protein.
Length = 276
Score = 94.7 bits (225), Expect = 7e-20
Identities = 72/212 (33%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Frame = +3
Query: 141 VGEDGEVKG-FDFTEKSIRRAFIRKVYAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFM 317
V DG + G + IR AF+RKV I+ QL+ T+G A +Y+ P + Q
Sbjct: 52 VDADGILPGCVGKANRMIRIAFLRKVLGIVGFQLLFTIGICAA-IYNIPNSNQLLQKHA- 109
Query: 318 FWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYEADAVLMAVG 497
W+ F L+ + + R+ P N++ LA FTA Q+ +G +++EA VL A
Sbjct: 110 -WIVFPNLLGSIALIIALHVYAREVPLNYVLLAAFTAVQAVTMGCVVTLFEAKVVLEAAV 168
Query: 498 ITAAVCLGLTLFALQTKWDFTM---MGGVLLCATIVLLVFGIVAIFVKGKVITLVYASLG 668
IT V L + LQ K DF++ G LLC VLL GI +F + V G
Sbjct: 169 ITGLVVASLFAYTLQNKRDFSVGYASMGSLLC---VLLWAGIFQMFFMSPAVNFVINVFG 225
Query: 669 ALIFSIYLVYDTXLMMGGKHKYSISPEEYIFA 764
A +F + LV D ++M Y SPE+YI A
Sbjct: 226 AGLFCVLLVIDLDMIM-----YRFSPEDYICA 252
>AC024777-1|AAF60563.1| 133|Caenorhabditis elegans Hypothetical
protein Y42H9AR.2 protein.
Length = 133
Score = 83.0 bits (196), Expect = 2e-16
Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Frame = +3
Query: 459 SVYEADAVLMAVGITAAVCLGLTLFALQTKWDFTMMGGVLLCATIVLLVFGIVA----IF 626
+ Y ADAVL+++ IT + LFA TK D T GV I L++FG++A IF
Sbjct: 7 ATYSADAVLISLLITTGCSASIILFAATTKKDLTSCLGVAFILGICLMLFGLMACIFCIF 66
Query: 627 VKGKVITLVYASLGALIFSIYLVYDTXLMMGGKHKYSISPEEYIFAA 767
+ + + +VYA LGAL+ YL D L+MGG+ + ISPEEYIFAA
Sbjct: 67 LNWQFLYIVYAVLGALLCMFYLAIDIQLIMGGR-RVEISPEEYIFAA 112
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 36.7 bits (81), Expect = 0.020
Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 4/139 (2%)
Frame = -1
Query: 629 HEYRHDTEY---KEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQ-HRIRFVD 462
H + TE+ K +G + A H P G + H +R ++ H H+ R VD
Sbjct: 106 HTAKRSTEHHRVKRSEGHPHEKKATHS--PEGHIVAKDDHHGHEKRSSDSHHGHQKRSVD 163
Query: 461 ACANAEQEALRCREDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHPDFGR 282
+++ ED E++ R H + Q GHPEH
Sbjct: 164 EHHGHQKKNA---EDHHEHQKRSEHVEHQAEMHEHQKRSTQEVSGHPEH----------H 210
Query: 281 SVVQEQSDETHRHHQLTHQ 225
V + + HRHH+ T Q
Sbjct: 211 LVKRSGGEGGHRHHRSTDQ 229
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 35.9 bits (79), Expect = 0.036
Identities = 42/179 (23%), Positives = 53/179 (29%), Gaps = 3/179 (1%)
Frame = -1
Query: 716 HHQXGVVDEVNGEYESAQGRVHERYDLTFHEYRHDTEYKEDDGGAEQHA-AHHGEVPLGL 540
HH+ + +G + G H + H H T + G HA AHHG
Sbjct: 389 HHEHAAHHDEHGVHHRHHGEHHGTHHSPAHHGEHGTHHGHH--GEHHHAPAHHGHHESHG 446
Query: 539 QSEQSQAQAHGRRYANCHQHRIRFVDACANAEQEALRCREDGQEYEVRRSFASHVGTARH 360
S A HG H H G+ SH A H
Sbjct: 447 HGHHSPAH-HGHHGE--HHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHH 503
Query: 359 RDETDYQHYEGHPEHEGILGHPDFGRSVVQEQSDETHRHH--QLTHQDRVHLSDESPAY 189
++ H H H G G G + H HH TH H S SPA+
Sbjct: 504 GHHGEHHHAPAHHGHHGEHG-THHGHHGEHHHAPAHHGHHGEHGTHHGH-HGSHHSPAH 560
Score = 34.7 bits (76), Expect = 0.083
Identities = 30/108 (27%), Positives = 36/108 (33%)
Frame = +2
Query: 497 HNGGRVPGPDSVRSADQVGLHHDGRRAALRHHRPPCIRYRGDIRER*GHNARVRVPGRSH 676
H+G P + G HH G HH P + G+ GH+ P H
Sbjct: 505 HHGEHHHAPAHHGHHGEHGTHH-GHHGE-HHHAPAHHGHHGEHGTHHGHHGSHHSPAH-H 561
Query: 677 ILHLPRLRHPXDDGGQAQVQHLARGVHLRGPQPLLGHHQHIPVHSDHH 820
H P G H + GVH G GH H P H HH
Sbjct: 562 GHHGEHHHAPAHHGHHGH--HGSHGVH-HGHHESHGHGHHAPAHHGHH 606
Score = 33.1 bits (72), Expect = 0.25
Identities = 32/154 (20%), Positives = 48/154 (31%)
Frame = -1
Query: 674 ESAQGRVHERYDLTFHEYRHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGRRYA 495
ES + H HE++ ++ +G +HAAHH E + + + HG ++
Sbjct: 359 ESEDEKKHAPAHHEHHEHKDGAHHEHKEGEHHEHAAHHDEHGV---HHRHHGEHHGTHHS 415
Query: 494 NCHQHRIRFVDACANAEQEALRCREDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEH 315
H H + E E H A H ++ H H H
Sbjct: 416 PAH-HGEHGTHHGHHGEHHHAPAHHGHHESHGH----GHHSPAHHGHHGEHHHAPAHHGH 470
Query: 314 EGILGHPDFGRSVVQEQSDETHRHHQLTHQDRVH 213
G H E TH H +H H
Sbjct: 471 HGEHHHAPAHHGHHGEHG--THHGHHGSHHSPAH 502
Score = 30.7 bits (66), Expect = 1.3
Identities = 36/142 (25%), Positives = 43/142 (30%), Gaps = 3/142 (2%)
Frame = +2
Query: 404 HIPGHLHGSAELPARH*RKRLRSGCGADGSWHNGGRVPGPDSVRSADQVGLHHDGRRAAL 583
H H HG PA H A H+G P + G HH G +
Sbjct: 441 HHESHGHGHHS-PAHHGHHGEHHHAPAHHG-HHGEHHHAPAHHGHHGEHGTHH-GHHGS- 496
Query: 584 RHHRPPCIRYRGDIRER*GHNARVRVPGRSHILHLPRLRHPXDDG--GQAQVQHLARGVH 757
HH P + G+ H+ G H H P G G+ H G H
Sbjct: 497 -HHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSH 555
Query: 758 LR-GPQPLLGHHQHIPVHSDHH 820
G H H P H HH
Sbjct: 556 HSPAHHGHHGEHHHAPAHHGHH 577
Score = 30.3 bits (65), Expect = 1.8
Identities = 37/140 (26%), Positives = 45/140 (32%), Gaps = 4/140 (2%)
Frame = +2
Query: 413 GHLHGSAELPARH*RKRLRSGCGADGSWHNGGRVPGPDSVRSADQVGLHHDGRRA-ALRH 589
GH HGS PA H G G H+ G + G+HH + H
Sbjct: 550 GH-HGSHHSPAHH---------GHHGEHHHAPAHHGHHGHHGSH--GVHHGHHESHGHGH 597
Query: 590 HRPPCIRYRGDIRER*GHN-ARVRVPGRSHILHLPRLRHPXDDGGQAQVQHLARGVHL-- 760
H P + G+ GH+ A H H H H + GVH
Sbjct: 598 HAPAHHGHHGEHGVHHGHHGAGYGAHHGHHGAHHHHAPHHEHHEHHGDHHHGSHGVHHGH 657
Query: 761 RGPQPLLGHHQHIPVHSDHH 820
G L HH H H HH
Sbjct: 658 HGTHHSLAHHGHHGGHGTHH 677
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 2/106 (1%)
Frame = -1
Query: 539 QSEQSQAQAHGRRYANCHQHRIRFVDACANAEQEALRCREDGQEYEVRRSFA-SHVGTAR 363
+ E+ + + H ++ H+ + +++ + E E + A +H
Sbjct: 316 EDEKKKKKVHHKKSHGKKHHKKAASSSSSSSSSSSSSSSSSSSESEDEKKHAPAHHEHHE 375
Query: 362 HRDETDYQHYEGHPEHEGILGHPDFGRSVVQEQSDETH-RHHQLTH 228
H+D ++H EG HE H + G V E H HH H
Sbjct: 376 HKDGAHHEHKEGE-HHEHAAHHDEHG--VHHRHHGEHHGTHHSPAH 418
Score = 28.7 bits (61), Expect = 5.4
Identities = 32/153 (20%), Positives = 42/153 (27%)
Frame = -1
Query: 686 NGEYESAQGRVHERYDLTFHEYRHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHG 507
+GE+ A H + H H + E H +HH G E A AH
Sbjct: 458 HGEHHHAPAH-HGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHH 516
Query: 506 RRYANCHQHRIRFVDACANAEQEALRCREDGQEYEVRRSFASHVGTARHRDETDYQHYEG 327
+ H G+ SH A H ++ H
Sbjct: 517 GHHGEHGTHHGHH----GEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPA 572
Query: 326 HPEHEGILGHPDFGRSVVQEQSDETHRHHQLTH 228
H H G H G +S H HH H
Sbjct: 573 HHGHHG--HHGSHGVHHGHHES-HGHGHHAPAH 602
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = -1
Query: 716 HHQXGVVDEVNGEYESAQGRVHERYDLTFHEYRHDTEYKEDDGGAEQHAAHHG 558
H GV +G + S H T H H + G +H AHHG
Sbjct: 648 HGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHG 700
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/87 (24%), Positives = 31/87 (35%)
Frame = +2
Query: 335 SADSLSHRDGVLSRRETQSSDELHIPGHLHGSAELPARH*RKRLRSGCGADGSWHNGGRV 514
S+ S S S ++S DE H H L H + S + S +
Sbjct: 164 SSSSSSSSSSSSSSSSSESEDEKH-HHKKHAKKHLKKHHKKAESSSSSSSSSSSSSSSSS 222
Query: 515 PGPDSVRSADQVGLHHDGRRAALRHHR 595
S S D+ HH + A +HH+
Sbjct: 223 SSSSSSESEDEK--HHHKKHAVKKHHK 247
>U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform a protein.
Length = 686
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 309 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYE 470
P++ A + +C+IA A RR+A FI + ++T + + G+ + YE
Sbjct: 622 PYVLASAMFITAICIIAFAITNARRRRAMRGFIEVDVYTPEERHVAGMQVNGYE 675
>U56966-9|AAK68242.1| 684|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform b protein.
Length = 684
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 309 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYE 470
P++ A + +C+IA A RR+A FI + ++T + + G+ + YE
Sbjct: 620 PYVLASAMFITAICIIAFAITNARRRRAMRGFIEVDVYTPEERHVAGMQVNGYE 673
>U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid
protein precursor protein.
Length = 680
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 309 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYE 470
P++ A + +C+IA A RR+A FI + ++T + + G+ + YE
Sbjct: 616 PYVLASAMFITAICIIAFAITNARRRRAMRGFIEVDVYTPEERHVAGMQVNGYE 669
>U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical
protein K11H12.8a protein.
Length = 342
Score = 32.7 bits (71), Expect = 0.33
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Frame = +3
Query: 489 AVGITAAVCLGLTLFALQTKWD-FTMMGGVLLCATIVLLVFGIVAIFVK-GKVITLVYAS 662
A TA + GL+ A+ + F MM G L V+ V I A F+ G + AS
Sbjct: 206 AAWYTAGIVGGLSATAITAPSEKFLMMSGPLAMGFGVVFVANIGAFFLPPGSALGASLAS 265
Query: 663 L----GALIFSIYLVYDTXLMMGGKHKYSISPEEY 755
+ G ++FS +L+YDT ++ + S + Y
Sbjct: 266 IVVYGGLILFSAFLLYDTQRLVKKAENHPHSSQLY 300
>AL132948-21|CAC51051.2| 453|Caenorhabditis elegans Hypothetical
protein Y39B6A.29 protein.
Length = 453
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 408 FLAIFTAAQSFLLGISASVYEADAVLMAVGI-TAAVCLGLTLFALQTKWDFTMMGGVLLC 584
+L+IFT A +F S Y A ++VG+ L +T + + K DF++ +L+
Sbjct: 267 WLSIFTTAMNFTAANSNLTYLAAIYPLSVGVGEIGTALFITQMSRRFK-DFSLQPTMLIG 325
Query: 585 ATIVLLVFGIVAI 623
A +L FG+V +
Sbjct: 326 AIFSILGFGLVHV 338
>U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform d protein.
Length = 1058
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -1
Query: 566 HHGEVPLGLQSEQSQAQAHGRRYANCHQHRIRFVDACANAEQEALRCREDGQE---YEVR 396
H GE P +E ++ Q GR ++ RF + ++ E++ ++ D Q E
Sbjct: 575 HRGETPPPTPNEGNKVQKAGRSHSVKGSFIRRFAKSSSSKEKKEVKIEVDNQSNSGIERS 634
Query: 395 RSFASHV 375
RSF SH+
Sbjct: 635 RSFHSHI 641
>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform c protein.
Length = 1211
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -1
Query: 566 HHGEVPLGLQSEQSQAQAHGRRYANCHQHRIRFVDACANAEQEALRCREDGQE---YEVR 396
H GE P +E ++ Q GR ++ RF + ++ E++ ++ D Q E
Sbjct: 728 HRGETPPPTPNEGNKVQKAGRSHSVKGSFIRRFAKSSSSKEKKEVKIEVDNQSNSGIERS 787
Query: 395 RSFASHV 375
RSF SH+
Sbjct: 788 RSFHSHI 794
>AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.
Length = 1058
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -1
Query: 566 HHGEVPLGLQSEQSQAQAHGRRYANCHQHRIRFVDACANAEQEALRCREDGQE---YEVR 396
H GE P +E ++ Q GR ++ RF + ++ E++ ++ D Q E
Sbjct: 575 HRGETPPPTPNEGNKVQKAGRSHSVKGSFIRRFAKSSSSKEKKEVKIEVDNQSNSGIERS 634
Query: 395 RSFASHV 375
RSF SH+
Sbjct: 635 RSFHSHI 641
>U58760-9|AAK31465.1| 654|Caenorhabditis elegans Dishevelled
related protein 2 protein.
Length = 654
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Frame = -1
Query: 686 NGEYE----SAQGRVHERYDLTFHEYRHDTEYKEDDGGAEQ-HAAHHGEVPLGLQSEQSQ 522
NG +E + +G VH H + D K G E AAHH + P ++SQ
Sbjct: 173 NGRFELYLLTVEGSVHSDTSSGRHRRKQDGSSKGSSGSREYLRAAHHYDNPTPFSDDESQ 232
Query: 521 AQA 513
A +
Sbjct: 233 ASS 235
>U80931-1|AAB37998.2| 343|Caenorhabditis elegans Hypothetical
protein T01B11.1 protein.
Length = 343
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 288 KVWVAQNPFMFWVAFIVLIV--CLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLL 446
K+W+ + FWV I +++ L+A A ++RK F+FL AA L
Sbjct: 8 KLWMFISKCQFWVILITVLISLLLVAKAFYNLMKRKRSNYFVFLISIIAANVLTL 62
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 309 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYEA 473
P M +A++V++VC+ A+ CC RR + + A++ AA G+ + YE+
Sbjct: 412 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA----YGVRPTAYES 460
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical protein
D1044.2c protein.
Length = 1090
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 309 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYEA 473
P M +A++V++VC+ A+ CC RR + + A++ AA G+ + YE+
Sbjct: 962 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA----YGVRPTAYES 1010
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical protein
D1044.2a protein.
Length = 1051
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 309 PFMFWVAFIVLIVCLIAMACCPDVRRKAPTNFIFLAIFTAAQSFLLGISASVYEA 473
P M +A++V++VC+ A+ CC RR + + A++ AA G+ + YE+
Sbjct: 962 PVMIILAWLVILVCIGAVVCCK--RRNSRESSQLRAMYGAA----YGVRPTAYES 1010
>Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 371 SRRETQSSDELHIPGHLHGSAELPARH*RKRLRSGCGADGSWHNGGRVPGPDSVRSADQV 550
S+R +++D H G L A++ + AD H G R G + ADQ
Sbjct: 293 SKRPARAADNSH-KGSLDADADMKRPARAAGQKGTQQADQEQHRGSRAAGEKGTQQADQE 351
Query: 551 GLHHDGRRAA 580
H G RAA
Sbjct: 352 --QHRGSRAA 359
>Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 371 SRRETQSSDELHIPGHLHGSAELPARH*RKRLRSGCGADGSWHNGGRVPGPDSVRSADQV 550
S+R +++D H G L A++ + AD H G R G + ADQ
Sbjct: 293 SKRPARAADNSH-KGSLDADADMKRPARAAGQKGTQQADQEQHRGSRAAGEKGTQQADQE 351
Query: 551 GLHHDGRRAA 580
H G RAA
Sbjct: 352 --QHRGSRAA 359
>Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical
protein ZK858.5 protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 312 FMFWVAFIVLIVCLIAMACCPDVRRKAPT 398
F+FW + +++VC+I + C V K T
Sbjct: 210 FLFWSSLFLMLVCVILLGCSRKVADKQVT 238
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 371 TARHRDETDYQHYEGHPEHEGILGHPD-FGRSVVQEQSDETHRHHQLTHQDRVH 213
T++H + +Y G H G + + + G+ V D+ H H+ H H
Sbjct: 896 TSQHSNAQEYSTVHGSQTHRGSVVYDEPHGQVVYDIPHDQEHHHYDTVHVQHHH 949
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Frame = -1
Query: 395 RSFASHVGTARHRDETD-YQHYEGHPEHEGILGHPDFGRSVVQEQSDE---THRHHQLTH 228
++ A+ TA D + H GH G H G S +E+ H HH +H
Sbjct: 64 KAAAAEAATAAAHDHGHAHDHDHGHAHDHGH-AHDHHGHSHDEEEDHHHGHAHDHHGHSH 122
Query: 227 QDRVHLSDESPAYRFFSEIETLDFAIF 147
+D H A + E + F F
Sbjct: 123 EDHGHSHGAESAKQVGDEYQYTGFLSF 149
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 679 NMRAPRDAYTSVMTLPFTNIATIPNTRRTMVAQSSTPP 566
N + R TS T P T + IP+ T +SST P
Sbjct: 400 NASSARPNVTSTTTAPTTESSAIPDVTSTTTTKSSTTP 437
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/89 (23%), Positives = 39/89 (43%)
Frame = -1
Query: 470 FVDACANAEQEALRCREDGQEYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHPD 291
F + ++A Q+ ++ ++D Q+++ A H+D+ + Q + H E + PD
Sbjct: 71 FQEDASSAHQD-VQDQKDHQDFQDLLDQPEETEDADHQDQLEDQESKDHREMQEDQEPPD 129
Query: 290 FGRSVVQEQSDETHRHHQLTHQDRVHLSD 204
VQ+Q D T QD + D
Sbjct: 130 -----VQDQQDHVENQEPSTSQDSQDVQD 153
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 275 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 379
PPT S GG S V+G + + R VLSRR
Sbjct: 724 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 758
>AF408759-1|AAO27838.1| 279|Caenorhabditis elegans LIN-36 protein.
Length = 279
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 275 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 379
PPT S GG S V+G + + R VLSRR
Sbjct: 41 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 75
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 275 PPTDQSLGGPKSLHVLGGLHSADSLSHRDGVLSRR 379
PPT S GG S V+G + + R VLSRR
Sbjct: 724 PPTSSSPGGIFSQRVMGAVAQEKGPAKRPSVLSRR 758
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 7.2
Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 6/135 (4%)
Frame = -1
Query: 578 QHAAHHGEVPLGLQSEQSQAQAH---GRRYANCHQHRIRFVDACANAE-QEALRCREDGQ 411
+H H GEVP S Q + H R+ +Q + A + E +E +
Sbjct: 689 EHFEHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAAS 748
Query: 410 EYEVRRSFASHVGTARHRDETDYQHYEGHPEHEGILGHPDFGR--SVVQEQSDETHRHHQ 237
+ E RS + H + H E ++H+E +H + + R SV + E HH+
Sbjct: 749 QEEFGRSPSVH---SPHVSE-HFEHHE-EAQHSPVASQEEAARSPSVHSSHASEHFEHHE 803
Query: 236 LTHQDRVHLSDESPA 192
QD S E A
Sbjct: 804 -EAQDSPVASQEKAA 817
>Z83218-3|CAB05688.1| 330|Caenorhabditis elegans Hypothetical
protein C31A11.6 protein.
Length = 330
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +3
Query: 216 YAILMCQLMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLIAMACCPDVRRKAP 395
Y I MC + V M F+ RPT V +F+ +F++LI+C + P + P
Sbjct: 96 YFIPMC-VSVLMTMNRFFIVIRPTDQRVFGQRRIFFYSFLILILC-FTLLLIPRL-SYCP 152
Query: 396 TNFI 407
NF+
Sbjct: 153 VNFL 156
>AF039710-5|AAB96689.2| 394|Caenorhabditis elegans Hypothetical
protein C46E10.4 protein.
Length = 394
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/92 (22%), Positives = 35/92 (38%)
Frame = -1
Query: 662 GRVHERYDLTFHEYRHDTEYKEDDGGAEQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQ 483
G H +D+ + +++D GG + L + +A R +
Sbjct: 60 GSNHYTFDIRRSNFGR--RFRDDFGGESDEEPEAAPLEPALAELNLRDRARREREILREE 117
Query: 482 HRIRFVDACANAEQEALRCREDGQEYEVRRSF 387
H R D A+Q + R +YEVRR+F
Sbjct: 118 HYQREDDERLRAQQNQVHIRYGETQYEVRRNF 149
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 272 QEQSDETHRHHQLTHQDRVHLSD 204
Q ++DE +H QL H++ +HLS+
Sbjct: 32 QSRADEAIKHQQLLHRNLLHLSN 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,215,706
Number of Sequences: 27780
Number of extensions: 418268
Number of successful extensions: 1706
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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