Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_I02
         (833 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.86 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   2.0  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   2.6  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   3.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   8.0  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 15/52 (28%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
 Frame = -1

Query: 344 YQHYEG--HPEHEGILGHPDFGRSVVQEQSDETHRHHQLTHQDRVHLSDESP 195
           +QH+    HP H G   H   G   +       H HH    Q   HL    P
Sbjct: 319 HQHHPSQYHP-HRGSSPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHLHYRQP 369


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -3

Query: 129  VGYSPVHRNLRRHMQVGSQAEGAHIRPCGYAPXRGIRSSW 10
            VG  P+    R+H   G   +  H   C     + IR SW
Sbjct: 1063 VGSGPMSEERRQHTAEGVPEQPPHDTTCTTLTSQTIRISW 1102


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -1

Query: 581 EQHAAHHGEVPLGLQSEQSQAQAHGRRYANCHQHR 477
           EQH  +  +      S+QSQ   H R+     QH+
Sbjct: 199 EQHMMYQQQQQSQAASQQSQPGMHPRQQQQAQQHQ 233



 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/40 (22%), Positives = 18/40 (45%)
 Frame = -1

Query: 338 HYEGHPEHEGILGHPDFGRSVVQEQSDETHRHHQLTHQDR 219
           H++ H +H  +       +S  Q+Q  + H  H +  Q +
Sbjct: 169 HHQMHTQHPHMQPQQGQHQSQAQQQHLQAHEQHMMYQQQQ 208



 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +2

Query: 749 GVHLRGPQPLLGHHQHIPVHSDH 817
           G     P P +GH  H P  + H
Sbjct: 109 GYRSASPSPGMGHMGHTPTPNGH 131


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = -1

Query: 338 HYE--GHPEHEGILGHPDFGRSVVQEQSDETHRHHQLTHQDRVHLSDESP 195
           HYE      H   L  P   R +   QS     HHQ+ +Q   +L  E+P
Sbjct: 45  HYERFSPSTHLMDLSSPPEHRDLPIYQSHHHLHHHQVLYQQSPYLMYENP 94


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +2

Query: 509 RVPGPDSVRSADQVGLHHDGRRAALRHHRPPCIRYRGDIRER*GHNARVRVPGRSHILHL 688
           R P P   R A+      + R   +   RPP  R R +     G+N  V +P +    H 
Sbjct: 82  RPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIP-QPRPPH- 139

Query: 689 PRLR 700
           PRLR
Sbjct: 140 PRLR 143


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 219 AILMCQ-LMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLI 356
           A++ C  ++ TM    L  +HR T V  A    +  +    ++VC +
Sbjct: 520 AVISCLGIVATMAVACLLFHHRDTPVVRASGRELTIILLAGVLVCYL 566


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 219 AILMCQ-LMVTMGFIALFLYHRPTKVWVAQNPFMFWVAFIVLIVCLI 356
           A++ C  ++ TM    L  +HR T V  A    +  +    ++VC +
Sbjct: 610 AVISCLGIVATMAVACLLFHHRDTPVVRASGRELTIILLAGVLVCYL 656


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 461 RLRSGCGADGSW 496
           RLR+GC AD  W
Sbjct: 378 RLRNGCPADWLW 389


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 330 FIVLIVCLIAMACCPDVRRKA 392
           FI+L+  +    C P+V+++A
Sbjct: 4   FIILLALVALGVCAPNVKQRA 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,055
Number of Sequences: 438
Number of extensions: 5244
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)