Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_I01
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.9  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   3.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.8  

>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 644 TKNPKKQTRPLSPTTTRK-QIELSLQN 721
           TKN +++T P   TTT K ++    QN
Sbjct: 297 TKNVRRKTNPAGVTTTTKGKVRAKTQN 323


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 644 TKNPKKQTRPLSPTTTRK-QIELSLQN 721
           TKN +++T P   TTT K ++    QN
Sbjct: 297 TKNVRRKTNPAGVTTTTKGKVRAKTQN 323


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 166 FFETLKTLFCQPFIYFVFVSTFVI-LYKFY 252
           +F  +  LFC  FI F     F++ +Y FY
Sbjct: 260 YFYYMHLLFCCAFIIFTMHLLFLLCIYYFY 289


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 331 ELRQYDGTQEGGRVLMAVNGWIF 399
           +L +Y+  +EG +V+  +  W F
Sbjct: 626 DLLEYEAKEEGPKVVCYMTNWAF 648


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 572 NNLERIMIWSVDF*GLVKNPGT 637
           NNL  +MIWS++   L    GT
Sbjct: 341 NNLAGVMIWSIETDDLHATCGT 362


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -2

Query: 566  HSLTDSISIELRSLKSS*SFSGAVTENVASPLVASLPPKTAYGPPGP*NRFPLV 405
            H + D +  +  +LKS+   S + +E V     A  PP  + GP    ++ P V
Sbjct: 1077 HFVKDGVIPDPVALKSAQQGSSSSSEGVPLKGTAVPPPSGSSGPGSTGSKSPPV 1130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,594
Number of Sequences: 336
Number of extensions: 4510
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)