Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_I01
(828 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0544 - 18655186-18655567,18656835-18657151 98 9e-21
10_08_0543 - 18649894-18650233,18651446-18651981 97 2e-20
02_05_0089 - 25715637-25716333,25716481-25717238 95 8e-20
03_02_0826 + 11569961-11570301,11572220-11572454 93 2e-19
02_05_1047 + 33745656-33745964 87 1e-17
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 37 0.023
03_02_0079 + 5485090-5485238,5486066-5486137,5486764-5486840,548... 33 0.28
01_05_0174 + 18919759-18920265,18920381-18920443,18921060-189217... 31 1.5
07_03_0382 + 17470508-17470807,17471449-17474517 30 2.6
11_01_0283 - 2095291-2095566,2095962-2096348,2096523-2096881,209... 29 3.4
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 29 6.0
03_01_0314 - 2477593-2480685 29 6.0
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 29 6.0
01_06_1827 + 40169001-40169263,40169358-40169472,40170090-401702... 29 6.0
01_06_0011 - 25559099-25559238,25559781-25559814,25560172-255603... 28 7.9
>10_08_0544 - 18655186-18655567,18656835-18657151
Length = 232
Score = 97.9 bits (233), Expect = 9e-21
Identities = 48/126 (38%), Positives = 73/126 (57%)
Frame = +1
Query: 316 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 495
+++ ELRQYDG+ +LMA+ G I+DVT+ FYGPGGPYA+F G+DA+R LA S
Sbjct: 73 EVSEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSF 132
Query: 496 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSA 675
P+ D+S L E++++++WE +F Y VG + + PE +T+A
Sbjct: 133 -EPQDLTGDISGLGPFELDALQDWEYKFMGKYVKVGTVKKTVPVEDGAPSTSPETTETAA 191
Query: 676 LPNDDK 693
+K
Sbjct: 192 AAEPEK 197
>10_08_0543 - 18649894-18650233,18651446-18651981
Length = 291
Score = 97.1 bits (231), Expect = 2e-20
Identities = 48/112 (42%), Positives = 71/112 (63%)
Frame = +1
Query: 274 SKVAPLKKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVF 453
S+ AP P ++TA EL QYDG+ +LMA+ G I+DV++ FYGPGGPYA+F
Sbjct: 132 SEEAPPPPEPVQVGEITAEELLQYDGSDPEKPLLMAIKGQIYDVSQSRLFYGPGGPYALF 191
Query: 454 GGRDATRGLATFSVTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 609
G+DA+R LA S P+ DD+S L+ +E+ ++++WE +F Y VG +
Sbjct: 192 AGKDASRALAKMSF-EPQDLTDDISGLSLLELSALQDWEYKFSSKYVKVGTI 242
>02_05_0089 - 25715637-25716333,25716481-25717238
Length = 484
Score = 94.7 bits (225), Expect = 8e-20
Identities = 45/98 (45%), Positives = 62/98 (63%)
Frame = +1
Query: 316 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 495
++T ELR YDG+ +LMA+ G I+DVT+ FYGPGGPYA+F GRDA+R LA S
Sbjct: 220 EVTEEELRVYDGSDPNKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGRDASRALAKMSF 279
Query: 496 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 609
+ D+S L +E+E++ EWE +F Y VG +
Sbjct: 280 ELDDLT-GDVSGLGPIELEALHEWEGKFMSKYVKVGTI 316
>03_02_0826 + 11569961-11570301,11572220-11572454
Length = 191
Score = 93.5 bits (222), Expect = 2e-19
Identities = 44/98 (44%), Positives = 61/98 (62%)
Frame = +1
Query: 316 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 495
++T +L YDG +L+A+ G ++DVTRG FYGP GPY++F GRDATR LA S
Sbjct: 81 EITLEQLAAYDGKDPAKPILIAIRGQVYDVTRGRLFYGPQGPYSLFAGRDATRALALMSF 140
Query: 496 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 609
P DL L E+E +++WE++F+E Y VG L
Sbjct: 141 D-PIDLTGDLDGLGPDELEVLQDWEDKFKERYPTVGHL 177
>02_05_1047 + 33745656-33745964
Length = 102
Score = 87.4 bits (207), Expect = 1e-17
Identities = 41/98 (41%), Positives = 60/98 (61%)
Frame = +1
Query: 316 DMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV 495
++TA +LR YDG+ + ++V G ++DVT G FYGPGG YAVF GR+A+R L S
Sbjct: 4 ELTAAQLRAYDGSDPSKPIYVSVRGKVYDVTSGRGFYGPGGAYAVFAGREASRALGKMSK 63
Query: 496 TAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 609
+ DLS L+ E+ + +WE +F+ Y +V RL
Sbjct: 64 DDADVS-GDLSGLSDKELGVLADWETKFQAKYPVVARL 100
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 36.7 bits (81), Expect = 0.023
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +1
Query: 172 ETLKTLFCQPFIYFVFVSTFVILYKFYYKYKTHCSKVAP-LKKLPKLRKDMTAVELRQYD 348
+ +KT+ VF S +L +FY + HC K+AP L+++ KD V + + D
Sbjct: 370 QPVKTVVADNLREVVFNSGKNVLLEFYAPWCGHCQKLAPILEEVAVSLKDDEDVVIAKMD 429
Query: 349 GTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDA 468
GT AV G+ FY GG + GR A
Sbjct: 430 GTANDVPSDFAVEGY-----PSMYFYSSGGNLLPYDGRTA 464
>03_02_0079 +
5485090-5485238,5486066-5486137,5486764-5486840,
5486946-5486989,5487583-5487639,5487640-5487686,
5488010-5488184,5489501-5489662,5489845-5489883
Length = 273
Score = 33.1 bits (72), Expect = 0.28
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 394 IFDVTRGNRFYGPGGPYAVFGG 459
+FDVT+G YGPGG Y F G
Sbjct: 52 VFDVTKGKSNYGPGGGYHHFAG 73
>01_05_0174 +
18919759-18920265,18920381-18920443,18921060-18921761,
18922934-18923068,18923391-18923474,18924095-18924151,
18924290-18924376,18924963-18925205
Length = 625
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 505 EKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL-LRPGEEPRNYSDEEPEEA 663
E+D DL ++ E E RE E Q R GR RP EE +EE EEA
Sbjct: 72 EEDEKDLEEMRRNEEEERRE-ETQTRRRRRRRGRKPKRPAEESEEDEEEEEEEA 124
>07_03_0382 + 17470508-17470807,17471449-17474517
Length = 1122
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 292 KKLPKLRKDMTAVELRQYDGTQEGGRVLMAVNGWIFDVTRGN 417
KK+P K + AV LR+ + TQE + + GW FD RG+
Sbjct: 359 KKIPMAVKIIGAV-LRRKEQTQESWQRVYEFEGWSFDDLRGD 399
>11_01_0283 -
2095291-2095566,2095962-2096348,2096523-2096881,
2097275-2097398,2097480-2097548,2098536-2098584,
2099185-2099299,2099823-2099872,2099969-2100106,
2101136-2101197,2102066-2102180,2103433-2103664,
2103748-2103826,2103925-2103993,2104079-2104171,
2104577-2104622,2105223-2105268,2105354-2105411,
2105577-2105615,2105712-2105783,2105930-2106021,
2106824-2106923
Length = 889
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 499 APEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRLLRPGE 624
AP K YD+ L M+ E + E EE F L+ + + G+
Sbjct: 2 APSKQYDEGGQLQLMDAERIEEEEECFESIDKLISQGINSGD 43
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 172 ETLKTLFCQPFIYFVFVSTFVILYKFYYKYKTHCSKVAPL 291
E +K + FVF S +L +FY + HC K+AP+
Sbjct: 384 EPVKVVVADNVHDFVFKSGKNVLVEFYAPWCGHCKKLAPI 423
>03_01_0314 - 2477593-2480685
Length = 1030
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 360 GWQSVDGCEWVDIRCD*RESV 422
GW S C W +RCD R +V
Sbjct: 50 GWSSAPHCTWKGVRCDARGAV 70
>02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +1
Query: 436 GPYAVFGGRDATRGLATFS--VTAPEKDYDDLSDLNSMEMESVREWEEQFRENYDLVGRL 609
G Y GR RGL + + + SDL ++ + E QFR Y ++ L
Sbjct: 856 GEYIQMAGRAGRRGLDNIGTVIVMCRDEIPEESDLKNLIVGKPTRLESQFRLTYTMILHL 915
Query: 610 LRPGE 624
LR E
Sbjct: 916 LRVEE 920
>01_06_1827 +
40169001-40169263,40169358-40169472,40170090-40170201,
40170556-40170623,40170798-40170852,40170948-40171027,
40171811-40171924,40172178-40172296,40173064-40173181,
40173264-40173394,40173535-40173688,40173922-40174017
Length = 474
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -2
Query: 458 PPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVPSYCRSSTAVISFRNLGSFFKGAT 279
PP A PP P P+V TA TLPP P+ S++ + + S G T
Sbjct: 35 PPPPAPPPPPPPRLEPVVVVAPSTTTATATLPPIITPTLSPSTSTCLECVHFNS-CSGCT 93
Query: 278 FE 273
E
Sbjct: 94 HE 95
>01_06_0011 -
25559099-25559238,25559781-25559814,25560172-25560333,
25560335-25560454
Length = 151
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 366 QSVDGCEWVDIRCD 407
Q VD C W D+RCD
Sbjct: 129 QDVDPCNWKDVRCD 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,691,241
Number of Sequences: 37544
Number of extensions: 467278
Number of successful extensions: 1412
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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