Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_H23
(752 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 26 0.37
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 24 1.1
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 24 1.1
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 23 2.6
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 23 3.5
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 23 3.5
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 22 6.0
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 22 6.0
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 22 6.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 8.0
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 21 8.0
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 8.0
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 25.8 bits (54), Expect = 0.37
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 546 VQQISTLSWQSSSPNLTSSTPHPVTLALLTSTPSLFLLHK**GT-HLQDSPFLSVNTLLL 370
V++ S L S+P LT ++P PV++ TST S HL+DSP L +
Sbjct: 137 VEKSSKLK-NKSAPILTKTSPTPVSINNNTSTSSSASSPSVTAAPHLRDSPNYIKPQLHV 195
Query: 369 SVGLT 355
S G T
Sbjct: 196 STGST 200
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1
Query: 277 PCLASEHLRNAPHAGEARHREPGRHHR*AYGEQQRVYG*ERG 402
P L ++ + N H G + +HH+ + +Q +YG ++G
Sbjct: 155 PPLTTQSMNNH-HMGHHMQEQHPQHHQPHHQQQHMMYGGQQG 195
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1
Query: 277 PCLASEHLRNAPHAGEARHREPGRHHR*AYGEQQRVYG*ERG 402
P L ++ + N H G + +HH+ + +Q +YG ++G
Sbjct: 157 PPLTTQSMNNH-HMGHHMQEQHPQHHQPHHQQQHMMYGGQQG 197
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 23.0 bits (47), Expect = 2.6
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 560 EPVPKPQPDPSK 595
EPVP P+P P++
Sbjct: 394 EPVPTPEPQPTQ 405
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 256 RPGHDLRPCLASEHLRNAPHAGEARHREPGRHH 354
RPG L+ S HL +A H A H P +H
Sbjct: 33 RPG--LQGLHHSPHLNHAMHPYHANHVNPTANH 63
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 512 EDCQESVEICCTNP 553
+DC E V+ C TNP
Sbjct: 94 KDCGEYVDWCSTNP 107
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 646 GDGHSDPHGVPVAASLQLRGVRL 578
G GH D P LQ G+RL
Sbjct: 153 GSGHQDSRTSPSGQHLQELGLRL 175
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 646 GDGHSDPHGVPVAASLQLRGVRL 578
G GH D P LQ G+RL
Sbjct: 153 GSGHQDSRTSPSGQHLQELGLRL 175
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2
Query: 646 GDGHSDPHGVPVAASLQLRGVRL 578
G GH D P LQ G+RL
Sbjct: 153 GSGHQDSRTSPSGQHLQELGLRL 175
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 8.0
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +2
Query: 401 ESCKCVPYYLCNK 439
+ C YYLCN+
Sbjct: 2245 DDTNCAQYYLCNQ 2257
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 21.4 bits (43), Expect = 8.0
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +3
Query: 378 ACLRIRTGNLANASPTIC 431
+C+ + G+ N++P+IC
Sbjct: 21 SCIAVGVGSGRNSAPSIC 38
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.4 bits (43), Expect = 8.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 534 STLSWQSSSPNLTSSTPHP 478
S LS ++PN +S++P+P
Sbjct: 56 SLLSPSGNTPNKSSTSPYP 74
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,269
Number of Sequences: 336
Number of extensions: 3777
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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