Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H23
         (752 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358867-1|AAQ89226.1|  352|Homo sapiens tryptophan/serine prote...    33   0.83 
CR456342-1|CAG30228.1|  605|Homo sapiens Em:AC002472.7 protein.        30   7.8  
BC032485-1|AAH32485.1|  598|Homo sapiens apoptosis-inducing fact...    30   7.8  
AK094844-1|BAC04434.1|  604|Homo sapiens protein ( Homo sapiens ...    30   7.8  
AK055035-1|BAB70841.1|  605|Homo sapiens protein ( Homo sapiens ...    30   7.8  
AJ011021-1|CAB56834.1|  466|Homo sapiens cardiac potassium chann...    30   7.8  

>AY358867-1|AAQ89226.1|  352|Homo sapiens tryptophan/serine protease
           protein.
          Length = 352

 Score = 33.5 bits (73), Expect = 0.83
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 569 PKPQPDPSKLKGCGYRNPMXXXXXXXXXXXX-EAXFGEFPWVVALLDALNESYAGVXVL 742
           P+P+  PS +  CG R+               EA  GEFPW V+ + A +E + G  +L
Sbjct: 41  PQPRHPPSPVSECGDRSIFEGRTRYSRITGGMEAEVGEFPWQVS-IQARSEPFCGGSIL 98


>CR456342-1|CAG30228.1|  605|Homo sapiens Em:AC002472.7 protein.
          Length = 605

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -2

Query: 640 GHSDPH-GVPVAASLQLRGVRLRL-WHGFRYGISAADL 533
           GH  PH G P+   +  RG R+R  WHG  + IS  DL
Sbjct: 106 GHKCPHYGAPLVKGVLSRG-RVRCPWHGACFNISTGDL 142


>BC032485-1|AAH32485.1|  598|Homo sapiens apoptosis-inducing factor,
           mitochondrion-associated, 3 protein.
          Length = 598

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -2

Query: 640 GHSDPH-GVPVAASLQLRGVRLRL-WHGFRYGISAADL 533
           GH  PH G P+   +  RG R+R  WHG  + IS  DL
Sbjct: 106 GHKCPHYGAPLVKGVLSRG-RVRCPWHGACFNISTGDL 142


>AK094844-1|BAC04434.1|  604|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37525 fis, clone BRCAN2009156, moderately
           similar to Xenopus laevis mRNA for Nfrl. ).
          Length = 604

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -2

Query: 640 GHSDPH-GVPVAASLQLRGVRLRL-WHGFRYGISAADL 533
           GH  PH G P+   +  RG R+R  WHG  + IS  DL
Sbjct: 112 GHKCPHYGAPLVKGVLSRG-RVRCPWHGACFNISTGDL 148


>AK055035-1|BAB70841.1|  605|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30473 fis, clone BRAWH1000094, moderately
           similar to Xenopus laevis mRNA for Nfrl. ).
          Length = 605

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -2

Query: 640 GHSDPH-GVPVAASLQLRGVRLRL-WHGFRYGISAADL 533
           GH  PH G P+   +  RG R+R  WHG  + IS  DL
Sbjct: 106 GHKCPHYGAPLVKGVLSRG-RVRCPWHGACFNISTGDL 142


>AJ011021-1|CAB56834.1|  466|Homo sapiens cardiac potassium channel
           subunit (Kv6.2) protein.
          Length = 466

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 332 CRASPAWGAFRRCSEAR-QGLRSCPGRD 252
           CR   AW A  RC  AR + LR+C G D
Sbjct: 26  CRVRLAWAALARCPLARLERLRACRGHD 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,723,775
Number of Sequences: 237096
Number of extensions: 2432469
Number of successful extensions: 10138
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10102
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)