Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H23
         (752 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78410-8|CAB01642.1|  556|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z78410-7|CAB01635.1|  652|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U04995-1|AAA56868.1|  652|Caenorhabditis elegans prohormone conv...    30   2.0  
Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical pr...    28   8.2  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   8.2  

>Z78410-8|CAB01642.1|  556|Caenorhabditis elegans Hypothetical
           protein C51E3.7b protein.
          Length = 556

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
 Frame = -2

Query: 643 DGHSDPHGVPVAASLQLRGVRLRLWHGFRYGISAADLHALLAVFFAEPDIQHSPPRH--- 473
           D H D HG       Q+ GV L   H F +G+  A    +LA+ +     + SPPR+   
Sbjct: 347 DNHRDSHGNCSHFEWQMNGVGLEYNHLFGFGVLDAAEMVMLAMAW-----KTSPPRYHCT 401

Query: 472 AGVINV-HPF-----IVLVTQIVGDAFARFPVLIRKHAVALRRLN 356
           AG+I+  H       ++L     G A ++F V   +H  A+   N
Sbjct: 402 AGLIDTPHEIPADGNLILEINTDGCAGSQFEVRYLEHVQAVVSFN 446


>Z78410-7|CAB01635.1|  652|Caenorhabditis elegans Hypothetical
           protein C51E3.7a protein.
          Length = 652

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
 Frame = -2

Query: 643 DGHSDPHGVPVAASLQLRGVRLRLWHGFRYGISAADLHALLAVFFAEPDIQHSPPRH--- 473
           D H D HG       Q+ GV L   H F +G+  A    +LA+ +     + SPPR+   
Sbjct: 443 DNHRDSHGNCSHFEWQMNGVGLEYNHLFGFGVLDAAEMVMLAMAW-----KTSPPRYHCT 497

Query: 472 AGVINV-HPF-----IVLVTQIVGDAFARFPVLIRKHAVALRRLN 356
           AG+I+  H       ++L     G A ++F V   +H  A+   N
Sbjct: 498 AGLIDTPHEIPADGNLILEINTDGCAGSQFEVRYLEHVQAVVSFN 542


>U04995-1|AAA56868.1|  652|Caenorhabditis elegans prohormone
           convertase 2 protein.
          Length = 652

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
 Frame = -2

Query: 643 DGHSDPHGVPVAASLQLRGVRLRLWHGFRYGISAADLHALLAVFFAEPDIQHSPPRH--- 473
           D H D HG       Q+ GV L   H F +G+  A    +LA+ +     + SPPR+   
Sbjct: 443 DNHRDSHGNCSHFEWQMNGVGLEYNHLFGFGVLDAAEMVMLAMAW-----KTSPPRYHCT 497

Query: 472 AGVINV-HPF-----IVLVTQIVGDAFARFPVLIRKHAVALRRLN 356
           AG+I+  H       ++L     G A ++F V   +H  A+   N
Sbjct: 498 AGLIDTPHEIPADGNLILEINTDGCAGSQFEVRYLEHVQAVVSFN 542


>Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical
           protein B0393.4 protein.
          Length = 803

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 533 EICCTNPITEPVPKPQPDP 589
           ++  T P+ EPVP+P P+P
Sbjct: 107 KVAVTLPVPEPVPEPVPEP 125


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 585  SGCGFG-TGSVMGLVQQISTLSWQSSSPNLTSSTPHPVTLALLTST 451
            SG GF  TG    +  QI  L   SS+P++    P P T A  TST
Sbjct: 1173 SGTGFSFTGDTQQVADQIG-LKMASSNPSVYCPPPVPSTAAPSTST 1217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,199,497
Number of Sequences: 27780
Number of extensions: 350781
Number of successful extensions: 1429
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)