Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_H21
(801 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory pro... 24 1.2
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 24 1.6
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 24 1.6
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 23 2.1
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 23 2.1
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 23 2.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
>DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory
protein 10 protein.
Length = 129
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/45 (26%), Positives = 17/45 (37%)
Frame = +2
Query: 308 KRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTAIE 442
+ L K PD S T + G + +HY N D +E
Sbjct: 61 EELKKALPDALHSGCSKCTEKQKEGSRKIIHYLIDNKRDWWNELE 105
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRL 316
L + G SG+GK+TLL L
Sbjct: 107 LAILGSSGAGKTTLLNTL 124
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRL 316
L + G SG+GK+TLL L
Sbjct: 107 LAILGSSGAGKTTLLNTL 124
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 222 FKNVVRVVIQFSVSDKITRSGSGYQYLKFTL 130
+ +V+ V S T SGYQYL+ TL
Sbjct: 147 YNHVLMVQRMIGSSQLGTGGSSGYQYLRSTL 177
Score = 21.4 bits (43), Expect = 8.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 479 NIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLD 592
N +G +KAV+ + K E E +K+ K DL+
Sbjct: 42 NFWGKYQKAVEKLLTEQKELAEKEEAETLKRYKLNDLE 79
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 222 FKNVVRVVIQFSVSDKITRSGSGYQYLKFTL 130
+ +V+ V S T SGYQYL+ TL
Sbjct: 307 YNHVLMVQRMIGSSQLGTGGSSGYQYLRSTL 337
Score = 21.4 bits (43), Expect = 8.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 479 NIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLD 592
N +G +KAV+ + K E E +K+ K DL+
Sbjct: 202 NFWGKYQKAVEKLLTEQKELAEKEEAETLKRYKLNDLE 239
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 222 FKNVVRVVIQFSVSDKITRSGSGYQYLKFTL 130
+ +V+ V S T SGYQYL+ TL
Sbjct: 307 YNHVLMVQRMIGSSQLGTGGSSGYQYLRSTL 337
Score = 21.4 bits (43), Expect = 8.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 479 NIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLD 592
N +G +KAV+ + K E E +K+ K DL+
Sbjct: 202 NFWGKYQKAVEKLLTEQKELAEKEEAETLKRYKLNDLE 239
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 104 NCACFMPG 127
NC CF+PG
Sbjct: 202 NCICFVPG 209
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 104 NCACFMPG 127
NC CF+PG
Sbjct: 202 NCICFVPG 209
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 104 NCACFMPG 127
NC CF+PG
Sbjct: 202 NCICFVPG 209
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +2
Query: 104 NCACFMPG 127
NC CF+PG
Sbjct: 202 NCICFVPG 209
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,305
Number of Sequences: 336
Number of extensions: 3980
Number of successful extensions: 25
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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