Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_H21
(801 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702... 194 9e-50
03_02_0825 + 11565701-11565862,11565963-11566154,11567674-115677... 76 3e-14
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 35 0.066
09_02_0303 + 7112456-7113244,7113328-7113488,7114523-7114583,711... 34 0.15
06_01_0421 - 3000486-3000595,3000909-3001148,3001659-3001722,300... 33 0.26
01_06_1699 - 39269477-39269574,39269690-39269929,39270029-392700... 33 0.35
11_06_0325 + 22376195-22377001,22377136-22377525,22377638-223777... 32 0.46
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 32 0.61
09_02_0434 + 9365038-9366150,9367352-9368680,9368906-9370012,937... 32 0.61
12_02_0781 + 23105554-23106855,23107191-23107511,23107581-231076... 31 0.81
02_04_0113 - 19861904-19862197,19862338-19862496,19862580-198638... 31 0.81
02_02_0074 + 6567362-6567550,6567685-6567753,6567869-6567970,656... 31 0.81
05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,582... 31 1.1
01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,380... 31 1.1
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 31 1.4
11_01_0346 - 2589111-2589220,2589613-2589852,2589956-2590028,259... 31 1.4
04_04_0961 + 29715938-29716034,29716918-29717133,29717438-297177... 31 1.4
01_01_0598 + 4443768-4443949,4444053-4444150,4444275-4444308,444... 31 1.4
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944... 30 1.9
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235... 30 1.9
02_02_0616 - 12160899-12161506,12161698-12161821,12161974-121620... 30 1.9
02_02_0492 - 10907529-10907629,10907714-10907953,10908035-109080... 30 1.9
02_02_0490 - 10879761-10879861,10879946-10880185,10880274-108803... 30 1.9
01_01_0134 - 1224084-1224269,1224578-1224662,1224763-1225050,122... 30 1.9
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218... 30 2.5
11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680 29 3.3
05_06_0196 + 26293889-26294122,26294317-26294375,26294454-262945... 29 3.3
04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141 29 3.3
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 29 3.3
08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,305... 29 4.3
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 29 4.3
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 29 4.3
06_03_1249 - 28688997-28689248,28689469-28689533,28690016-286900... 29 4.3
05_03_0017 - 7392742-7393110,7393212-7393319,7393522-7394079,739... 29 4.3
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 29 4.3
03_06_0267 - 32751431-32751489,32751600-32751645,32751886-327519... 29 4.3
01_07_0299 + 42594363-42594424,42594516-42594798,42595185-425954... 29 4.3
05_06_0022 + 24988363-24988453,24989102-24989325,24989433-249894... 29 5.7
05_05_0023 + 21605803-21605917,21606054-21606148,21606261-216063... 29 5.7
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047... 29 5.7
03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922... 29 5.7
03_01_0179 - 1443508-1443624,1443712-1443773,1444904-1444971,144... 29 5.7
02_05_0385 - 28506326-28506891,28506993-28507405,28507496-285077... 29 5.7
11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830 28 7.5
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 28 7.5
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 28 7.5
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 28 7.5
06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 28 7.5
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149... 28 7.5
04_04_0582 + 26369537-26369914,26371598-26371887,26371985-263721... 28 7.5
03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306... 28 7.5
10_06_0182 - 11552540-11552606,11552692-11552787,11553458-115535... 28 9.9
08_02_1614 - 28243532-28244589,28245149-28245383,28245524-282457... 28 9.9
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 28 9.9
08_01_0397 - 3509186-3510291,3510322-3512335 28 9.9
05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309... 28 9.9
04_04_1232 - 31956286-31956463,31957822-31957880,31959343-319593... 28 9.9
03_02_0091 + 5574528-5577254 28 9.9
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 28 9.9
01_06_1486 - 37709159-37709377,37709558-37709821,37709903-377099... 28 9.9
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 28 9.9
>12_02_0529 -
20067974-20068588,20069982-20070048,20070156-20070264,
20070357-20070402,20070501-20070636,20070745-20070866,
20070944-20071306,20071914-20072043,20072129-20072202,
20072620-20072709,20072836-20072875,20073047-20073117,
20074248-20074277
Length = 630
Score = 194 bits (472), Expect = 9e-50
Identities = 86/187 (45%), Positives = 125/187 (66%)
Frame = +2
Query: 239 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNL 418
++ +G +P+V+ GPSG GK TL+ +L+KE+P KFGFSVSHTTRAPR E +GVHYHFT
Sbjct: 169 VIGEGQKPIVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRAPREKEIDGVHYHFTER 228
Query: 419 NDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPL 598
+ + I +G+F+E A GN+YGTS +AV+ V GK C+LDI+++G + ++ + L+ +
Sbjct: 229 SKIEEEISEGKFLEFAHVHGNVYGTSVEAVESVTDEGKRCILDIDVQGARSVRASSLEAI 288
Query: 599 LVFVMPPSIDELERRLRARNTEQEDSLKKRLETARXEIKFGQXPGXXXXXXXXXXLDKAY 778
+FV PPS +ELE+RLRAR TE E+ ++KRL AR E+ PG L+ Y
Sbjct: 289 FIFVCPPSFEELEKRLRARGTETEEQIQKRLRNARAELDQSNSPGLFDHLLVNDDLEACY 348
Query: 779 NELRDFI 799
L+ +
Sbjct: 349 ENLKKLL 355
>03_02_0825 +
11565701-11565862,11565963-11566154,11567674-11567718,
11568224-11568535,11569036-11569092
Length = 255
Score = 76.2 bits (179), Expect = 3e-14
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 16/170 (9%)
Frame = +2
Query: 254 PRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMST 433
P LV+ GPSG GK +++RL +E + F V+ T+RA R GE +G Y+F + T
Sbjct: 36 PMILVISGPSGVGKDAVIQRLQEE-REGMHFVVTATSRAKRPGEVDGKDYYFVTKEEFLT 94
Query: 434 AIEKGEFIETAIFSGNIYGTSKK------AVDDVRRTGKI---------CVLDIEMEGVK 568
IE+ E +E A+ G G K+ +V D+ G+I VL ++++G
Sbjct: 95 MIERKELLEYALVYGEYKGIPKQQVFPPFSVRDLIEWGEIRDYMAKGYDIVLRVDIQGAA 154
Query: 569 QIKRT-DLDPLLVFVMPPSIDELERRLRARNTEQEDSLKKRLETARXEIK 715
++ + +F++ S + L +RL R TE D L R+ TAR E+K
Sbjct: 155 TLREILGESAIFIFLVAESEEALVKRLIHRKTETSDMLLVRVATAREEVK 204
>06_03_0473 +
21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 35.1 bits (77), Expect = 0.066
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 242 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFS 349
+++G + + +CGP GSGKS+LL LL E P G S
Sbjct: 433 IRRGEK-VAVCGPVGSGKSSLLCALLGEIPRTSGMS 467
>09_02_0303 +
7112456-7113244,7113328-7113488,7114523-7114583,
7114665-7114733,7114862-7114947,7115399-7115456,
7115631-7115843,7116059-7116124,7116368-7116484,
7116595-7116657
Length = 560
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 254 PRPLVLCGPSGSGKST-LLKRLLKEFPD 334
P+PL+L GP G GKST LL+RLL ++ +
Sbjct: 37 PQPLILHGPRGVGKSTLLLRRLLPQWSE 64
>06_01_0421 -
3000486-3000595,3000909-3001148,3001659-3001722,
3001969-3002274,3002365-3002579,3003047-3003341,
3003487-3003651,3003745-3004341,3004855-3004941,
3005022-3005342,3006218-3008242
Length = 1474
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 239 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 343
+V K + +CG GSGKSTLL +L E P G
Sbjct: 640 LVVKSGEKVAICGEVGSGKSTLLASVLGEVPKTEG 674
>01_06_1699 -
39269477-39269574,39269690-39269929,39270029-39270092,
39270251-39270771,39271032-39271326,39271400-39271564,
39271650-39272237,39272617-39272703,39272982-39274429,
39274515-39275015,39275574-39275678,39276095-39276143
Length = 1386
Score = 32.7 bits (71), Expect = 0.35
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 242 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 331
+ KG + + +CGP GSGKS+LL ++ E P
Sbjct: 560 ISKGQK-VAVCGPVGSGKSSLLYSIMGEIP 588
>11_06_0325 +
22376195-22377001,22377136-22377525,22377638-22377778,
22377888-22378067,22378268-22378447,22378536-22378637,
22378768-22378896,22379318-22379422,22379528-22379623
Length = 709
Score = 32.3 bits (70), Expect = 0.46
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 239 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG-FSVSHTTRAPRAGEKNGVHYH 406
+V++G + + + GP+G GKSTLLK +L + G + P E+N +H H
Sbjct: 455 IVERGEK-IAIIGPNGCGKSTLLKLILGMEKTQGGEVLLGEHNVLPNYFEQNQIHVH 510
>09_04_0727 +
19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 254 PRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTR 367
PR ++LCGP G+GK TL+ R L K G VS R
Sbjct: 419 PRGVLLCGPPGTGK-TLIARALACAASKAGQKVSFYMR 455
>09_02_0434 +
9365038-9366150,9367352-9368680,9368906-9370012,
9370960-9371022
Length = 1203
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 242 VQKGPRPLV-LCGPSGSGKSTLLKRLLKEF 328
+ +GP ++ +CGP G GK+ LLKR+ F
Sbjct: 149 ITEGPSAIIGICGPGGVGKTHLLKRINNNF 178
>12_02_0781 +
23105554-23106855,23107191-23107511,23107581-23107667,
23107907-23108302,23108327-23108500,23108600-23108764,
23108857-23109151,23109319-23109446,23109681-23109986,
23110531-23110591,23110676-23110915,23111251-23111372
Length = 1198
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 239 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 331
MV+ G + + +CG GSGKS+LL +L E P
Sbjct: 400 MVKSGTK-VAICGEVGSGKSSLLAAILGEVP 429
>02_04_0113 -
19861904-19862197,19862338-19862496,19862580-19863833,
19864086-19864124
Length = 581
Score = 31.5 bits (68), Expect = 0.81
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +2
Query: 380 GEKNGVHYHFTNLNDMSTAIEKGEFIETAIFSGNIYGTSKKAV----DDVRRTGKICVLD 547
G H H NL+++ +++K E ++ + GN K+A+ VR K C++
Sbjct: 249 GNFQDFHLHAPNLSNLDVSLDKTEAQQSVVVEGNRKNYLKQAMVSLTSIVRLVMKRCIIA 308
Query: 548 I--EMEGVKQI 574
+ E EG KQ+
Sbjct: 309 LPQEFEGFKQL 319
>02_02_0074 +
6567362-6567550,6567685-6567753,6567869-6567970,
6568386-6568627,6569057-6569195,6569298-6569333,
6569838-6569972,6570315-6570547,6571204-6571298,
6571331-6571374,6571808-6571888
Length = 454
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 248 KGPRPLVLCGPSGSGKSTLLKRLL 319
+GPR +++ GPS SGKSTL K LL
Sbjct: 120 QGPR-VIIVGPSDSGKSTLCKMLL 142
>05_02_0030 +
5826065-5826092,5826307-5828309,5828412-5828732,
5828821-5828907,5828981-5829583,5829680-5829844,
5829941-5830235,5830320-5830534,5830621-5830926,
5831200-5831263,5831384-5831623,5831756-5831853
Length = 1474
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRLLKEFPDKFG 343
+ +CGP G+GKS+LL +L E P G
Sbjct: 650 IAVCGPVGAGKSSLLCAMLGEIPRMSG 676
>01_01_0517 +
3803740-3806106,3806226-3806312,3806397-3807035,
3807118-3807282,3807363-3807657,3807739-3807953,
3808125-3808430,3808539-3808602,3808735-3808974,
3809150-3809253
Length = 1493
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 245 QKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 343
Q+G R + +CG GSGKS+LL +L E P G
Sbjct: 650 QQGMR-IAVCGTVGSGKSSLLSCILGEIPKLSG 681
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 30.7 bits (66), Expect = 1.4
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Frame = +2
Query: 245 QKGPRPLV-LCGPSGSGKSTLLKRLLKE---FPDKFGFSVSHTTRAPRAGEKNGVHYHFT 412
Q P P+V L G + +GKSTLL RL DK ++ TTR R KNG + T
Sbjct: 249 QSVPIPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTR--RVLMKNGTEFLLT 306
Query: 413 NLNDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGV-KQIKRTDL 589
D I+K + A F + S+ +V + +++ V K +K D+
Sbjct: 307 ---DTVGFIQKLPTMLVAAFRATLEEISESSVIVHLVDISHPLAQQQIDAVDKVLKELDI 363
Query: 590 DPLLVFVMPPSIDELERRLRARNTEQEDSL 679
+ + V+ ID + LR + ++ +
Sbjct: 364 ESIPKLVVWNKIDNTDDTLRVKEEAEKQGI 393
>11_01_0346 -
2589111-2589220,2589613-2589852,2589956-2590028,
2590301-2590606,2590698-2590912,2591461-2591755,
2591901-2592065,2592142-2592738,2593029-2593115,
2593203-2593523,2594047-2596071
Length = 1477
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRLLKEFPDKFG 343
+ +CG GSGKSTLL +L E P G
Sbjct: 648 VAICGEVGSGKSTLLAAVLGEVPKTEG 674
>04_04_0961 +
29715938-29716034,29716918-29717133,29717438-29717776,
29718247-29719274,29719465-29719551,29719636-29720043,
29720394-29720558,29720742-29721036,29721131-29721345,
29721838-29722143,29722474-29722537,29722644-29722883,
29722959-29723062
Length = 1187
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 242 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 343
V++G + + +CG GSGKS+LL +L E P G
Sbjct: 420 VKRGMK-VAICGMVGSGKSSLLSSILGEMPKLAG 452
>01_01_0598 +
4443768-4443949,4444053-4444150,4444275-4444308,
4444629-4444780,4444871-4445051,4445707-4445887,
4446034-4446142,4446324-4446451,4446758-4446832
Length = 379
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 245 QKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 343
+ P +V+CGP +GKST + LL ++G
Sbjct: 31 EPAPPVVVVCGPKNAGKSTFSRLLLNSLLPRYG 63
>06_03_0710 +
23792138-23792293,23792974-23793257,23794344-23794499,
23795318-23795804,23795864-23796181,23796773-23797165,
23797752-23798021
Length = 687
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRL 316
L L GPSGSGK+TLLK L
Sbjct: 104 LALMGPSGSGKTTLLKIL 121
>03_01_0300 +
2350232-2352274,2352349-2352669,2352752-2352838,
2353031-2353708,2353800-2353964,2354139-2354433,
2354581-2354795,2354885-2355190,2355269-2355332,
2355426-2355665,2355783-2355886
Length = 1505
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 242 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 343
V +G R + +CG GSGKS+LL +L E P G
Sbjct: 648 VVRGMR-VAVCGVIGSGKSSLLSSILGEIPKLCG 680
>02_02_0616 -
12160899-12161506,12161698-12161821,12161974-12162083,
12162119-12162271,12162545-12162779
Length = 409
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 383 EKNGVHYHFTNLNDMSTAIEKGEFIETAIFSG 478
++NG H HF N + A+ KG +E ++F+G
Sbjct: 89 QRNGHHGHFVEGNHYAEAVIKGPRLEISLFTG 120
>02_02_0492 -
10907529-10907629,10907714-10907953,10908035-10908098,
10908416-10908721,10909347-10909561,10909656-10909950,
10910493-10910597,10911112-10911180,10911433-10911519,
10911953-10913704,10914964-10915054,10915217-10915488
Length = 1198
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 242 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 331
+++G R + +CG GSGKS+LL +L E P
Sbjct: 565 IRQGMR-VAICGTVGSGKSSLLSCILGEIP 593
>02_02_0490 -
10879761-10879861,10879946-10880185,10880274-10880337,
10880426-10880731,10881098-10881312,10881417-10881711,
10882193-10882357,10882477-10882527,10882657-10883109,
10883195-10883281,10883736-10884800,10884858-10885376
Length = 1186
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 242 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 331
+++G R + +CG GSGKS+LL +L E P
Sbjct: 388 IRQGMR-VAICGTVGSGKSSLLSCILGEIP 416
>01_01_0134 -
1224084-1224269,1224578-1224662,1224763-1225050,
1225114-1225334,1225511-1225642,1226218-1226494,
1226722-1226770,1226993-1227088,1227779-1227911,
1228241-1228391,1228484-1228674,1229167-1229382
Length = 674
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +2
Query: 248 KGPRPLVLCGPSGSGKSTLLKRL 316
K R L L GPSGSGK+TLL L
Sbjct: 85 KSGRLLALMGPSGSGKTTLLNVL 107
>03_06_0003 +
30921197-30921388,30921514-30921632,30921742-30921811,
30922078-30922161,30922258-30922344,30922431-30922501,
30922648-30922702,30923374-30923509,30925009-30925103,
30925203-30925357,30925435-30925543,30925761-30925817,
30925913-30926027,30926177-30926264,30926738-30927501,
30927600-30927688,30928315-30928422,30928550-30928657,
30928887-30928977,30929235-30929287,30929557-30929712,
30930763-30930825,30931491-30931535,30932075-30932130,
30933051-30933132,30933238-30933354,30933428-30933530,
30933912-30934062,30934180-30934417,30934564-30934764,
30934850-30934935,30935036-30935135
Length = 1347
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = -1
Query: 231 IKSFKNVVRVVIQFSVSDKITRSGSGYQYLKFTLLPGIKQAQLXKLKXAVVK 76
+ KNVVR +FS K SGSG +KF + IKQ L K V+
Sbjct: 123 VSDHKNVVRCA-KFSPDGKYFASGSGDTSIKFFEVAKIKQMMLGDSKDGPVR 173
>11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680
Length = 612
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAP 373
L + GPSGSGKSTLL L + +V RAP
Sbjct: 72 LAVLGPSGSGKSTLLSILGGRLAGRHAGTVLAGGRAP 108
>05_06_0196 +
26293889-26294122,26294317-26294375,26294454-26294554,
26294638-26294717,26294856-26294906,26295225-26295299,
26295386-26295463,26295700-26295756,26296226-26296296,
26296395-26296494,26296574-26296678,26296763-26296825,
26296940-26297062,26297129-26297193,26297352-26297358
Length = 422
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAG 382
++L GP+GSGK TLL + L F D F ++ T +AG
Sbjct: 123 ILLIGPTGSGK-TLLAKTLARFAD-VPFVIADATAITQAG 160
>04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141
Length = 606
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 242 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 343
V G R V+ GP+G+GKSTLLK L E G
Sbjct: 398 VSMGQRVAVV-GPNGAGKSTLLKLLAGELTPTSG 430
>04_04_0962 +
29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 242 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 331
+ KG + + +CG GSGKS+LL +L E P
Sbjct: 460 IHKGMK-VAVCGAVGSGKSSLLSCVLGEMP 488
>08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,
3057104-3057232,3057313-3057572,3057688-3058001,
3058268-3058491,3058862-3059214,3059489-3059916,
3060031-3061514
Length = 1242
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 242 VQKGPRPLVLCGPSGSGKSTLLKRLLK 322
++ G R + L GPSG+GKST++ LL+
Sbjct: 1014 IEPGQR-VALVGPSGAGKSTIVSLLLR 1039
>08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 239 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 343
+++ G R + L GPSG+GKS++L LL+ + + G
Sbjct: 1018 VIEPGQR-VALVGPSGAGKSSVLALLLRFYDPQRG 1051
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 649 AESSFQFIYRWWHHKDQQGIQVCAFDLLHPFHFNIQHTYFAST 521
A+S+F F+ W +K Q + V + HPF + H +F+ T
Sbjct: 430 ADSTFSFLLEQWKNKLPQDLIVKKAHVDHPFEEDPCHCHFSFT 472
>06_03_1249 -
28688997-28689248,28689469-28689533,28690016-28690093,
28691480-28691824,28693314-28693510,28695601-28696601
Length = 645
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = +2
Query: 254 PRPLVL--CGPSGSGKSTLLKRL 316
PR +V+ GPSGSGKSTLL+ L
Sbjct: 451 PRGVVVGVIGPSGSGKSTLLRAL 473
>05_03_0017 -
7392742-7393110,7393212-7393319,7393522-7394079,
7394186-7394311,7394396-7394521,7394673-7395137,
7396822-7396901,7397394-7397664
Length = 700
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 257 RPLVLCGPSGSGKSTLLKRL 316
R + + GPSGSGKSTLL L
Sbjct: 70 RVVAIMGPSGSGKSTLLDAL 89
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTT 364
+ GPSG GK+TL K LL+ + + S S TT
Sbjct: 486 IAFVGPSGGGKTTLAKLLLRLYQPQSVASWSATT 519
>03_06_0267 -
32751431-32751489,32751600-32751645,32751886-32751960,
32752045-32752114,32752288-32752386,32752505-32752641,
32753040-32753221,32753314-32753482,32753824-32753856,
32753958-32754068,32754184-32754295,32755592-32755727,
32756264-32756291
Length = 418
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRLLKE 325
L+ GPSGSGK TL+ L+K+
Sbjct: 101 LLFYGPSGSGKKTLVMALIKQ 121
>01_07_0299 + 42594363-42594424,42594516-42594798,42595185-42595409,
42596395-42596592,42596871-42597325,42597824-42597962,
42598035-42598113,42598686-42598924,42599058-42599362,
42599449-42599560,42599640-42599804,42599933-42600071,
42600111-42600219,42600733-42600823,42600940-42601064,
42601148-42601297,42601383-42601455,42601630-42601810,
42601888-42602046,42602939-42603085,42603176-42603220,
42603305-42603382,42603565-42603719,42603875-42603927,
42604012-42604090,42604271-42604357
Length = 1310
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 257 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSH 358
+ L++ GP+GSGKS++ + L D+ + +SH
Sbjct: 1140 KSLLVTGPNGSGKSSIFRVLRGTLRDQIIYPLSH 1173
>05_06_0022 +
24988363-24988453,24989102-24989325,24989433-24989494,
24990219-24990440,24990740-24990869,24991373-24991698,
24991910-24992051,24992169-24992414
Length = 480
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 248 KGPRPLVLCGPSGSGKSTLLKRLLKE 325
+ P L++ G G+GKST+LK +LKE
Sbjct: 175 RSPVLLLMGGGMGAGKSTVLKDILKE 200
>05_05_0023 +
21605803-21605917,21606054-21606148,21606261-21606318,
21606458-21606652,21607001-21607080,21607182-21607247,
21607572-21607680,21608161-21608247,21608315-21608393,
21608490-21608622
Length = 338
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = -3
Query: 778 IGFVQIIIXNDDIEVSRXLTKFNLXSCRFQSLFQAIFLF-RITGAESSFQFIYRWWHHKD 602
+G + D +E F L C F A+F+F IT +F+Y H
Sbjct: 179 VGEEYCVKKKDRVEFVAMFALFGLLLCLFAGFAVALFMFYSITPFVLKVKFLY----HIR 234
Query: 601 QQGIQVCAFDLLHPFHFNIQHTYFASTTYII 509
Q+ + +++ PF NI+H +++I+
Sbjct: 235 QEMVANEWINIVQPFTPNIRHVGSRHSSFIL 265
>04_03_0826 +
20103105-20103697,20104222-20104391,20104487-20104716,
20104825-20104933,20104967-20105154,20105818-20105919,
20106114-20106395,20106504-20106625,20106708-20107020,
20107096-20107329,20107477-20107767,20107975-20108286
Length = 981
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSV 352
L+ CGP+G GK+ L K L + G S+
Sbjct: 673 LIFCGPTGVGKTELTKALAASYFGSVGHSL 702
>03_05_0398 +
23790257-23790323,23791116-23791339,23792208-23792275,
23794738-23794980,23795108-23795237,23797235-23797954
Length = 483
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 245 QKGPRPLVLCGPSGSGKSTLLKRLLKE 325
++ P L++ G G+GKST+LK +L+E
Sbjct: 175 ERSPVLLLMGGGMGAGKSTVLKEILQE 201
>03_01_0179 -
1443508-1443624,1443712-1443773,1444904-1444971,
1445811-1445868,1446439-1446629,1447164-1447359,
1448396-1448609
Length = 301
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 654 VIRNKKIA*KRDWKRHEXRL--NLVXNRETSISSFXMIIWTKPIMSCV 791
V +KK A R + H ++ NL +R+TS+ ++ +T PI+ CV
Sbjct: 53 VAHHKKEADPRRRRPHRTKVIDNLYVDRKTSVMILSILKYTGPILECV 100
>02_05_0385 - 28506326-28506891,28506993-28507405,28507496-28507743,
28507820-28508480,28508572-28509498,28509588-28509847,
28509943-28510143,28515547-28515633,28516200-28516375,
28516465-28516519,28516623-28516910
Length = 1293
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 239 MVQKGPRPLVLCGPSGSGKSTLLKRLLK 322
++ K + + L G SGSGKST+L +L+
Sbjct: 1066 LLMKAGKSMALVGMSGSGKSTVLSLILR 1093
>11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830
Length = 160
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = +2
Query: 251 GPRPLVLCGPSGSGKSTLLKRL---LKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLN 421
GPR ++ GP+GSGKS+L+ + L P G S R E V +
Sbjct: 58 GPRLNLVLGPNGSGKSSLVCAIALALAADPGVLGRVASVGAFVKRGEESGHVKISLAGTH 117
Query: 422 DMSTAIEKGEFIETAIFSGNIYG 490
+ + +G I SG+ G
Sbjct: 118 PNTLSASRGRSIPRTSPSGSSMG 140
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 269 LCGPSGSGKSTLLKRL 316
L GPSGSGKSTLL L
Sbjct: 106 LMGPSGSGKSTLLDAL 121
>09_02_0569 -
10752756-10753164,10753229-10753644,10754149-10755349,
10756770-10756991,10757615-10757767,10757883-10758034,
10758142-10758222,10758353-10758598,10759394-10759516
Length = 1000
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 269 LCGPSGSGKSTLLKRL 316
+CG GSGK+TLLK+L
Sbjct: 480 ICGMGGSGKTTLLKQL 495
>07_03_0635 +
20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 248 KGPRPLVLCGPSGSGKSTLLKRLLKEFPDK 337
K R +L GP SGKSTL++ L + PDK
Sbjct: 195 KPSRMTLLLGPPSSGKSTLMRALTGK-PDK 223
>06_01_0718 +
5233030-5233062,5233329-5233383,5233543-5233660,
5233746-5233902,5234033-5234113,5234213-5234320,
5234448-5234483
Length = 195
Score = 28.3 bits (60), Expect = 7.5
Identities = 43/152 (28%), Positives = 59/152 (38%), Gaps = 2/152 (1%)
Frame = +2
Query: 266 VLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAP-RAGEKNGVHYHFTNLNDMSTAIE 442
VL GP GSGK T +++ F S RA +G +NG E
Sbjct: 28 VLGGP-GSGKGTQCSNIVEHF-GFIHLSAGELLRAEINSGSENGTMIDTIITEGKIVPSE 85
Query: 443 KG-EFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVFVMPP 619
+ ++ AI G G K +D R + V+ E V I P V
Sbjct: 86 ITIKLLQEAIIKG---GNDKYIIDGFPRNEENRVV---FESVISIS-----PEFVLFFDC 134
Query: 620 SIDELERRLRARNTEQEDSLKKRLETARXEIK 715
S +E+ERRL RN + D +ET R +K
Sbjct: 135 SEEEMERRLLGRNQGRSDD---NIETIRKRLK 163
>06_01_0193 -
1491710-1491739,1492194-1492319,1492631-1492766,
1493048-1493112,1493213-1493305,1493433-1493498,
1493763-1493843,1493977-1494032,1494692-1494780,
1495340-1495425,1495531-1495647,1496109-1496254,
1496665-1496725,1496831-1496914,1497028-1497135,
1497286-1497388,1497802-1497845,1498100-1498584,
1499417-1499603,1500150-1500362,1501066-1501323
Length = 877
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 257 RPLVLCGPSGSGKSTLLKRLLKEFPDKFG 343
+ + + G SGSGKST+L+ L + F G
Sbjct: 650 KSVAIVGTSGSGKSTILRLLFRFFDSSSG 678
>04_04_0582 +
26369537-26369914,26371598-26371887,26371985-26372156,
26372271-26372393,26372499-26372627,26372785-26372979,
26373128-26373214,26373296-26373568,26374166-26374273,
26374363-26374686
Length = 692
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 269 LCGPSGSGKSTLLKRL 316
L GPSGSGKSTLL L
Sbjct: 83 LMGPSGSGKSTLLDAL 98
>03_01_0393 -
3062859-3062972,3063027-3063311,3063472-3063759,
3063844-3064161,3064232-3064415,3064504-3064659,
3066394-3066620,3066734-3066804,3067090-3067534
Length = 695
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRL 316
L L GPSGSGK+TLL L
Sbjct: 203 LALMGPSGSGKTTLLSIL 220
>10_06_0182 -
11552540-11552606,11552692-11552787,11553458-11553528,
11553660-11553764,11554149-11554239,11554331-11554381,
11554478-11554566,11554667-11554909,11555027-11555190,
11555883-11555988,11556075-11556242,11557456-11557494,
11557582-11557713
Length = 473
Score = 27.9 bits (59), Expect = 9.9
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Frame = +2
Query: 257 RPLVLCGPSGSGKSTLL-KRLLKEFPDKFGFSVSHTTRAPR------AGEKNGVHYHFTN 415
R LV+CGP +G L+ R L F K SV + R P+ + + F
Sbjct: 66 RVLVICGPGNNGGDGLVAARHLHHFGYK--PSVCYPKRTPKPLYSGLCTQLESLTIPFVP 123
Query: 416 LNDMSTAI-EKGEFIETAIFSGNIYGTSKKAVDD-VRRTGKICVLD 547
+ D+ + E+ + I A+F + +GT + DD + R + +D
Sbjct: 124 VEDLPANLSEEFDIIIDAMFGFSFHGTPRPPFDDLINRLVSLSAID 169
>08_02_1614 -
28243532-28244589,28245149-28245383,28245524-28245734,
28245834-28245907,28246465-28246665
Length = 592
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLK 310
+ L GP+G+GKSTLLK
Sbjct: 406 IALVGPNGAGKSTLLK 421
>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
Length = 757
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRL 316
L + GPSGSGK+TLL L
Sbjct: 162 LAMLGPSGSGKTTLLTAL 179
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 623 IDELERRLRARNTEQEDSLKKRLETARXEIK 715
++E ERR + + E++ L + +ET R IK
Sbjct: 151 VEEAERRRQKKKEEEQKQLDEEMETRRRRIK 181
>05_04_0148 -
18426903-18427106,18430516-18430594,18430752-18430935,
18431020-18431063,18432028-18432165,18432713-18434511
Length = 815
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRL 316
L + GPSG+GKSTLL+ L
Sbjct: 98 LAVVGPSGAGKSTLLRIL 115
>04_04_1232 -
31956286-31956463,31957822-31957880,31959343-31959385,
31959599-31959679,31959779-31959890,31960764-31960824,
31961853-31962518
Length = 399
Score = 27.9 bits (59), Expect = 9.9
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSV---SHTTRAPRAGEKNGVHYHFTNLND--- 424
LVL G +GSGKST L R+L F V H +P ++ + ++ +L D
Sbjct: 39 LVLTGANGSGKSTFL-RMLAGFSRPSAGEVLWNGHDITSPGVFQQYKLQLNWMSLKDAVK 97
Query: 425 -MSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLL 601
T ++ ++ E + G +G S A+ ++ G++ M + Q KR L LL
Sbjct: 98 EKLTVLDNVQWFE--LLEGK-HGKSAPAI-ELMGLGRLMNEKARMLSMGQRKRLQLARLL 153
Query: 602 VFVMP 616
P
Sbjct: 154 AIDRP 158
>03_02_0091 + 5574528-5577254
Length = 908
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRLLKEF 328
+ +CG +G GKSTLL+R+ F
Sbjct: 175 VAICGMAGVGKSTLLRRINNVF 196
>02_05_0449 -
29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 263 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSH 358
++ GP GSGKS+L + ++ E +VSH
Sbjct: 720 IIFKGPPGSGKSSLCRAVVTEIFGDSSLNVSH 751
>01_06_1486 -
37709159-37709377,37709558-37709821,37709903-37709995,
37710387-37710581,37710665-37710763,37710884-37711132,
37711264-37711467,37711543-37711602,37711731-37711913,
37712382-37712999,37713101-37713169,37713275-37713853
Length = 943
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 8/40 (20%)
Frame = +2
Query: 596 LLVFVMP----PSIDELERR----LRARNTEQEDSLKKRL 691
+LVF +P ID+L RR +R R+TE+E LKKR+
Sbjct: 261 MLVFAIPVFLVKYIDQLRRRNTDSIRLRSTEEEVPLKKRI 300
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 248 KGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFS 349
K R +L GP GSGK+TLL L + D S
Sbjct: 227 KPRRMTLLLGPPGSGKTTLLLALAGKLEDNLKVS 260
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,446,150
Number of Sequences: 37544
Number of extensions: 413478
Number of successful extensions: 1331
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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