Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_H20
(827 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 30 1.8
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 3.1
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 3.1
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 3.1
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 3.1
U10414-10|AAA19077.1| 176|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81482-3|CAB03955.2| 392|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z75955-12|CAB00115.2| 485|Caenorhabditis elegans Hypothetical p... 28 9.4
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 28 9.4
AF016666-3|AAB66085.1| 212|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical
protein C27H6.3 protein.
Length = 660
Score = 58.8 bits (136), Expect = 4e-09
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 16/150 (10%)
Frame = +1
Query: 424 ALEKWKQERISEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPRSQLRI------EKE-- 579
AL W++ +I EMG+ F +M++GTK H +++ + ++ EK
Sbjct: 444 ALYLWQKAKIDEMGLSAFKSSMTERMSLGTKTHTKVEEMLKLGHHESKLNNLIDNEKNAA 503
Query: 580 VEGVWVSVADVLKSISSPK-AI-ESNVVHPVLKYRGIFDAIADYEDKPTLIEWK-----K 738
+ S V+ I P+ AI E V HP L Y+G FDA+ Y+D +++WK
Sbjct: 504 IRNFMKSAMPVILEIQDPQNAICEKKVRHPTLAYQGRFDAVVKYKDYWNILDWKTTPARS 563
Query: 739 SDKPRKSIXLTYDNPV-XLAAYFGAVCNDL 825
S ++ L+Y + V LAAY A +D+
Sbjct: 564 SFSTQREDSLSYTSYVRQLAAYASAFNHDV 593
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +1
Query: 394 NKTMTEESRLALEKWKQERISEMGVEEFNR 483
N+T+ +++ ++LE W+Q R + GV + ++
Sbjct: 287 NQTIMDKTSMSLENWRQNRANSFGVHDISK 316
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 403 MTEESRLALEKWKQERISEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPR-SQLRIEKE 579
M EE + L+ +++R GVE F + +A+M TK H L + Q + L E+E
Sbjct: 794 MKEEYEVKLQLAEKDR---QGVENFGKECEARMNELTKIHEMLMEEHDQLKVDHLHTEEE 850
Query: 580 VE 585
VE
Sbjct: 851 VE 852
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 403 MTEESRLALEKWKQERISEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPR-SQLRIEKE 579
M EE + L+ +++R GVE F + +A+M TK H L + Q + L E+E
Sbjct: 794 MKEEYEVKLQLAEKDR---QGVENFGKECEARMNELTKIHEMLMEEHDQLKVDHLHTEEE 850
Query: 580 VE 585
VE
Sbjct: 851 VE 852
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 403 MTEESRLALEKWKQERISEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPR-SQLRIEKE 579
M EE + L+ +++R GVE F + +A+M TK H L + Q + L E+E
Sbjct: 554 MKEEYEVKLQLAEKDR---QGVENFGKECEARMNELTKIHEMLMEEHDQLKVDHLHTEEE 610
Query: 580 VE 585
VE
Sbjct: 611 VE 612
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 403 MTEESRLALEKWKQERISEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPR-SQLRIEKE 579
M EE + L+ +++R GVE F + +A+M TK H L + Q + L E+E
Sbjct: 794 MKEEYEVKLQLAEKDR---QGVENFGKECEARMNELTKIHEMLMEEHDQLKVDHLHTEEE 850
Query: 580 VE 585
VE
Sbjct: 851 VE 852
>U10414-10|AAA19077.1| 176|Caenorhabditis elegans Hypothetical
protein F42A10.6 protein.
Length = 176
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +1
Query: 592 WVSVADVLKSISSPKAIESNVVHPVLKYRGIFDAIADYEDKPTLIEWKKSDKPRKSIXLT 771
W SV +++ A + V P+ + + D+ D P +I K+DKP + L
Sbjct: 97 WSSVP-TFGLLNNIDACTNGVPCPIEPKNKVINLELDFSDTPAIINLLKNDKPYQLEYLL 155
Query: 772 YDNP 783
+D+P
Sbjct: 156 HDDP 159
>Z81482-3|CAB03955.2| 392|Caenorhabditis elegans Hypothetical
protein C40H5.4 protein.
Length = 392
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 731 HSIKVGLSS*SAMASKIPLYFSTGCTTFDSMAFGEDILFNT 609
H +VG S A+ I L G T DS FG+D +F +
Sbjct: 51 HQFRVGSVSKPVTAAAIMLLIDKGHFTLDSKLFGKDSIFGS 91
>Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical
protein F02H6.1 protein.
Length = 537
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 412 ESRLALEKWKQERISEMGVEEFNRFYQAQ 498
+S+ A E+ +++R+ E+G FNRF Q Q
Sbjct: 242 DSQFAQEEQRRDRLREIGQRIFNRFEQQQ 270
>Z75955-12|CAB00115.2| 485|Caenorhabditis elegans Hypothetical
protein R07B7.6 protein.
Length = 485
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 433 KWKQERISEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPRSQLRIEKEVEG 588
KWK+ I MGVE N ++Q + K T D+ T + I++ G
Sbjct: 403 KWKRHGICIMGVEYMNELIKSQQVIANKVMATF-DFGTIACMREMIKRNTAG 453
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +1
Query: 136 VIRPFAHSTVIQGLNNK---MWQNTRH-CLN-LFGVLLNNTAIRGLKTSVVCGTAKSSPA 300
V PFA I + N+ M+ N + C+N L G N L+ ++ CG AK +PA
Sbjct: 770 VFLPFAVRYDIGDVQNRTLNMFANVKSACINSLNGTAWCNPYSTNLRKAIYCGAAKYAPA 829
Query: 301 QPGY 312
Y
Sbjct: 830 TSDY 833
>AF016666-3|AAB66085.1| 212|Caenorhabditis elegans Hypothetical
protein B0281.6 protein.
Length = 212
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 727 RLKSVCLRNQQWHQKFPYTSVRGVQ 653
R+ S C+ N +W + +P S+R +Q
Sbjct: 179 RVWSFCIFNSEWSENYPLKSLRDIQ 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,660,348
Number of Sequences: 27780
Number of extensions: 441406
Number of successful extensions: 1270
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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