Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H20
         (827 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    24   2.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   2.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   8.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   8.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   8.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   8.0  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 676 YTSVRGVQHSILWLLEKIYFSTHLLQTPIHPPLPSLYEAGYEVE*SNP 533
           YT+  G Q SI ++ ++  F       P  PP+P   +   E   ++P
Sbjct: 77  YTAPDGQQVSITYVADENGFQVQGSHIPTAPPIPPEIQRALEWNAAHP 124


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -1

Query: 281 VPHTTDVFKPRIAVLFKRTPKRFKQC-LVFCHIL 183
           VP+T   F PR AV     P   + C LV  H L
Sbjct: 145 VPYTVKNFHPRCAVNNYNDPSNVRNCELVGLHDL 178


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 647 RMLYTPY*SIGEFLMPLLI 703
           R  Y  Y S+G F +PLL+
Sbjct: 193 RQGYVIYSSLGSFFIPLLL 211


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 647 RMLYTPY*SIGEFLMPLLI 703
           R  Y  Y S+G F +PLL+
Sbjct: 193 RQGYVIYSSLGSFFIPLLL 211


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 461 WELKNLIDFTKLKWQLVPSFTTL*RITSLNLV 556
           W+LKNL +   L   L P + ++  +  L ++
Sbjct: 15  WDLKNLTEAEYLAKVLGPKYLSMRMVIPLTII 46


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 647 RMLYTPY*SIGEFLMPLLI 703
           R  Y  Y S+G F +PLL+
Sbjct: 193 RQGYVIYSSLGSFFIPLLL 211


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.132    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,424
Number of Sequences: 438
Number of extensions: 5046
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)