Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_H19
(664 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 38 0.002
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 32 0.085
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 31 0.20
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.26
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 30 0.34
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 30 0.34
SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces pombe... 29 0.45
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 29 0.45
SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosacchar... 29 0.45
SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces pomb... 29 0.79
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 0.79
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 28 1.4
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 28 1.4
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 1.8
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 27 2.4
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 2.4
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 27 2.4
SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 27 3.2
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 27 3.2
SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr... 26 4.2
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 26 4.2
SPBC146.11c |mug97|meu33|meiotically upregulated gene Mug97|Schi... 26 4.2
SPCC191.03c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 4.2
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 26 5.6
SPBC336.04 |cdc6|pol3, pold, mis10|DNA polymerase delta catalyti... 25 7.4
SPAC1F12.06c |||endonuclease |Schizosaccharomyces pombe|chr 1|||... 25 7.4
SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Ma... 25 7.4
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 9.7
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 25 9.7
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 25 9.7
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 25 9.7
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 25 9.7
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 423 ELSVWKEYENLKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRKESQCHVQDAERRVLLL 602
EL + + LKK L EAE+ LK+ ++ +VS ++ + E+R+ +L
Sbjct: 59 ELKLNNTIKQLKKSLSEAETKLKRLDEKQATPELQVSDSKEMEEQLELQKSQFEKRISIL 118
Query: 603 QKVSEQLQSKKTDL-XETMNI 662
+K E LQ K +L E+M +
Sbjct: 119 EKEKEDLQRKMEELTVESMEV 139
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.9 bits (69), Expect = 0.085
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 420 EELSVWKEYEN-LKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRKESQCHVQDAERRVL 596
EE KE E LKK+ QEA+ +Q L EK + +R+E ++ RR
Sbjct: 663 EEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDKEEEERRRRE 722
Query: 597 LLQKVSEQLQSK 632
LL+K SE+ + +
Sbjct: 723 LLEKESEEKERR 734
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 30.7 bits (66), Expect = 0.20
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +3
Query: 438 KEYENLKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRKESQCHVQDAERRVLLLQKVSE 617
+EYE+L ++ + AES L++ ++E L K + Q+ E+ + R+V LL+ E
Sbjct: 41 QEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEA----EQLSRKVELLE---E 93
Query: 618 QLQSKKTDLXET 653
+L++ L ET
Sbjct: 94 ELETNDKLLRET 105
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 357 DDIKKCKKTFEYKKNNNDTVPEELSVWK-EYENLKKRLQEAESNLKQNKQELHLLIEKVS 533
++I + E K+ ND + +LSV EYENL + +L+ +L + + V
Sbjct: 1025 ENIASLQTEIEKKRAENDDLQSKLSVVSSEYENLLLISSQTNKSLEDKTNQLKYIEKNVQ 1084
Query: 534 TKLTQRKESQCHVQDAERRVLLLQKVSEQLQSK 632
L ++ + +++ + L + + Q++ +
Sbjct: 1085 KLLDEKDQRNVELEELTSKYGKLGEENAQIKDE 1117
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 29.9 bits (64), Expect = 0.34
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +3
Query: 420 EELSVWKEYENLKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRKESQCHVQDAERRVLL 599
EEL+V ++ + E ES+L+ +KQE+ +L EK+ K+ + Q V
Sbjct: 247 EELTVQASQKH--SHIAEMESSLQTSKQEVLILKEKIK-KIEDERMRQMSVSSDRTLDSQ 303
Query: 600 LQKVSEQLQSKKTDL 644
LQ V+E + T +
Sbjct: 304 LQTVNENITRISTSI 318
Score = 25.0 bits (52), Expect = 9.7
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +3
Query: 306 EVESKNVIKFKKQLVFIDDIKKCKKTFEYKKNNNDTVPEELSVWKEYENLKKRLQEAESN 485
E+ES K+ ID + KTFE + NN + ++L+ E++ L++ A +
Sbjct: 877 EIESAKFSGLNKE---IDSLSTSMKTFESEINNGELTIQKLN--HEFDRLEREKSVAITA 931
Query: 486 LKQNKQE 506
+ ++E
Sbjct: 932 INHLEKE 938
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.34
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 267 RGQYYIVWRSLMEEVESKNVIKFKKQLVFIDDIK--KCKKTFEYK---KNNNDTVPEELS 431
+ Q W + +E S + K++V + I C K F + +N+ ++ + +
Sbjct: 238 KNQSIASWTIIDQEETSSDDESLSKEIVNSNPIMCMVCNKNFRSQNQLENHENSKKHKKN 297
Query: 432 VWKEYENLKKRLQEAESNLKQNKQ 503
+ K + +KK +EA+ N + NKQ
Sbjct: 298 LRKMNQEIKKHAKEAQKNAESNKQ 321
>SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 746
Score = 29.5 bits (63), Expect = 0.45
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 336 KKQLVFIDDIKKCKKTFEYKKNNNDTVPEELSVWK--EYENLKKRLQEAESNLKQNKQEL 509
+++L + ++ + KT +YK+ ++T P E + K EY+ L K A+ N
Sbjct: 410 ERELNQLRNMAEASKTIDYKE--DETAPTERRIQKILEYDILSKLFSAAKHYNSLNGLLA 467
Query: 510 HLLIEKVSTKLTQRK 554
+L+ + KL +RK
Sbjct: 468 MILVHMANYKLARRK 482
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 29.5 bits (63), Expect = 0.45
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Frame = +3
Query: 279 YIVWRSLMEEVESKNVIKFKKQLVFI--DDIK------------KCKKTFEYKKNNNDTV 416
Y+ ++E++ N KFKKQ+V + ++ K ++ KK ++TV
Sbjct: 589 YLEILKVIEQMLESNEQKFKKQIVSLASENAKLAAQRDAAVENANYSRSLIQKKTTDETV 648
Query: 417 PEEL-SVWK-EYENLKKRLQEAESNLKQNKQELHLL--IEKVSTKLTQRKESQCHVQDAE 584
+ V K EYE ++ L+EA S ++N + LL E S L R E C D
Sbjct: 649 GSLIEKVGKLEYE-VQGTLEEATSYYQKNTELQQLLKQNESASELLKSRNEKLCVDYDKL 707
Query: 585 R--------RVLLLQKVSEQLQSKKTDLXETM 656
R ++L LQK +E LQS+ + E +
Sbjct: 708 RSVFEEDSSKILSLQKENENLQSQILQISEEL 739
>SPBP8B7.10c |||U3 snoRNP-associated protein Utp16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 29.5 bits (63), Expect = 0.45
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +3
Query: 399 NNNDTVPEELSVWKEYENLKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRKESQCHVQD 578
+++D PEE+S+ + +KKRLQ + N ELH VS L + ++
Sbjct: 163 SDSDEAPEEVSLKSSSDEVKKRLQRLKGN------ELHSTAHFVSLLLIVLFLTHFRLRK 216
Query: 579 AERRVLLLQ 605
AER LQ
Sbjct: 217 AEREKRRLQ 225
>SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 424
Score = 28.7 bits (61), Expect = 0.79
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 408 DTVPEELSVWKEYENLKKRLQEAESNLKQNKQELHLLIEKVS 533
D+ + +KE E +KK L +S L N+Q+++ L EKVS
Sbjct: 287 DSSRRAVLAYKEREGIKKDLCGFDSRLLFNQQQMNELWEKVS 328
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.7 bits (61), Expect = 0.79
Identities = 26/95 (27%), Positives = 41/95 (43%)
Frame = +3
Query: 375 KKTFEYKKNNNDTVPEELSVWKEYENLKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRK 554
K EY + E+ S+ ++ L Q E L++ + L ++ ST L +
Sbjct: 844 KSGIEYSSRIKTLMLEKQSLSEDNRKLLDNQQMMEIKLQELNGVIELEKQRFST-LEAKF 902
Query: 555 ESQCHVQDAERRVLLLQKVSEQLQSKKTDLXETMN 659
Q + +ER LL +S+ LQSK T L N
Sbjct: 903 TQQKNTSYSEREALLESSLSD-LQSKHTSLESQYN 936
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 27.9 bits (59), Expect = 1.4
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 438 KEYENLKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRKESQCH-VQDAERRVLLLQKVS 614
+EYE L+ + SNL Q L+ I+ S Q K+S V D E ++ L +
Sbjct: 381 EEYEGLRSEADKLNSNLLFKLQTLNRNIKVTS----QSKDSLTSIVGDLESKIKSLHESV 436
Query: 615 EQLQSKKTDLXETMN 659
L +++ DL +N
Sbjct: 437 SSLDTERADLLAKIN 451
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 468 QEAESNLKQNKQELHLLIEKVSTKLTQRK--ESQCHVQDAERRVLLLQKVSEQLQSKKTD 641
+E ES + NK LH +E+ TK+T +++ V+ E + E+ SK+T+
Sbjct: 422 EEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEKTDSKETE 481
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 375 KKTFEYKKNNNDTVPEELSVWKEYENLKKRLQEAESN 485
+KT NN T PE+ +VW ++ + R +E +
Sbjct: 444 RKTSTPVSNNRPTTPEQQAVWDVFQRIYTRFTGSEGS 480
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 360 DIKKCKKTFEYKKNNNDTVPEELSVWKEYENLKKRLQEAESNLKQNKQELHLLIE 524
D+KK K + + +N + EEL K LK +E SN K+ E L++
Sbjct: 809 DMKKIKLSISFSQNKSAARHEEL---KNLSTLKSLAKEFLSNYKEENLENSTLVQ 860
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.1 bits (57), Expect = 2.4
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Frame = +3
Query: 291 RSLMEEVESKNVIKFKKQLVFIDDIKK--CKKTFEYKKNNNDTVPEELSVWKEYENLKKR 464
+SL E + +K+ + K +I D K + +K N ++ +E S+ + + +KK
Sbjct: 981 KSLQETIVTKDA-ELDKLTKYISDYKTEIQEMRLTNQKMNEKSIQQEGSLSESLKRVKKL 1039
Query: 465 LQEAE------SNLKQNKQELHLLIEKVSTKLTQRKESQCHVQDAERRVLLLQKVSEQLQ 626
+E S LKQ K+EL +L + +E +++ +++ L+K E L
Sbjct: 1040 ERENSTLISDVSILKQQKEELSVLKGVQELTINNLEEKVNYLEADVKQLPKLKKELESLN 1099
Query: 627 SK 632
K
Sbjct: 1100 DK 1101
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +3
Query: 423 ELSVWKEYENLKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRKE----SQCHVQDAERR 590
+L K E L K+L AES LK+N ++ E + +++ + Q + + R
Sbjct: 339 DLETPKLVEELTKQLHVAESTLKENSEKFKQNSESLKSRVDNLNDYITKLQNEIDECRRN 398
Query: 591 VLLLQKVSEQLQSKKTDLXETMN 659
+L + E ++ + + +N
Sbjct: 399 LLWAESSCETIREENQKNIKKLN 421
>SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3'
ss-tail|Schizosaccharomyces pombe|chr 3|||Manual
Length = 957
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 487 KLD-SASCNLFLRFSYSFHTESSSGTVSLLFFLYSKVFLHFLMS 359
KLD SAS + L+F Y S +SLL FL ++ HFL+S
Sbjct: 279 KLDNSASFSDLLKFVYKTSKPSPYAKISLLHFLLTE-SKHFLIS 321
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 26.6 bits (56), Expect = 3.2
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 375 KKTFEYKKNNNDTVPEELSVWKEYENLKKRL--QEAESNLKQNKQELHLLIEKVSTKLTQ 548
++ FE+ K NN +E + + N K L SNL KQ+ +L +K+ + L +
Sbjct: 358 RRDFEFAKRNNIIFSKESCIGSYFTNEGKELLNHHDSSNLMDIKQK--MLQQKIVSYLEE 415
Query: 549 RK 554
+K
Sbjct: 416 KK 417
>SPAC23C4.05c |||LEA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 431
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 333 FKKQLVFIDDIK-KCKKTFEYKKNNNDTVPEELSVW 437
++K L ++ + KCK +E +KN+ ++L VW
Sbjct: 99 WRKPLQYVSKVTDKCKSFYEKEKNHASHNAQKLDVW 134
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 438 KEYENLKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRKESQCHVQDAERRVLL 599
K E L + N Q K E+H++IEK +L +KE + Q R +L
Sbjct: 561 KRCEEYVDTLTNRDLNNHQEKSEVHVVIEKAVARL--KKEDRLLPQIGRMREML 612
>SPBC146.11c |mug97|meu33|meiotically upregulated gene
Mug97|Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 579 HPGHDTETLFVESI*LRLSQSEDEAPVYFVSNWILLLAIFS*G 451
HPG T E I S+ P+Y ++ W+L L +FS G
Sbjct: 251 HPGCRTVAERYEQIEASGSEELLIIPIYKINMWVLSLLLFSAG 293
>SPCC191.03c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 117
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1
Query: 448 SYSFHTESSSGTVSLLFFLYSKVFLHFLMSSIKTSCFLNLITFFDSTSSIRLRHTI 281
SY + S + LL FL+S + F ++S SC + + F+ + S R ++
Sbjct: 49 SYRQASYSLGFPLGLLVFLHSLIVARFFVASKSRSCIVRSLLFWINLDSADSRISV 104
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 25.8 bits (54), Expect = 5.6
Identities = 29/128 (22%), Positives = 50/128 (39%)
Frame = +3
Query: 267 RGQYYIVWRSLMEEVESKNVIKFKKQLVFIDDIKKCKKTFEYKKNNNDTVPEELSVWKEY 446
R +Y + L EE+ES +F K L I K +DTVPE K
Sbjct: 1306 RDEYQDEYGVLQEEIESTFSNRFLKILNRIIKSYLAKSKQRKSGGKDDTVPEVGQALKPL 1365
Query: 447 ENLKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRKESQCHVQDAERRVLLLQKVSEQLQ 626
E++ + E + ++ EK+ ++ Q + +A++ L K S +++
Sbjct: 1366 EDIDEAPIEGRAQEALEDEDNDATNEKMVSRSKQHASYE-GPDEADKVALRQLKGSNKVE 1424
Query: 627 SKKTDLXE 650
D E
Sbjct: 1425 DVNMDEEE 1432
>SPBC336.04 |cdc6|pol3, pold, mis10|DNA polymerase delta catalytic
subunit Cdc6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +3
Query: 408 DTVPEELSVWKEYENLKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRKESQCHVQDAER 587
DT ++ + ++ E + ++ S+L QNK ++ L+ + T HV+ AER
Sbjct: 830 DTALRKMLIDQDVEGAQLFTKKVISDLLQNKIDMSQLVITKALSKTDYAAKMAHVELAER 889
>SPAC1F12.06c |||endonuclease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 252
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 402 NNDTVPEELSVWKEYE-NLKKRLQEAESNLKQNKQELHLLIEKVSTKLTQRKESQCHVQD 578
NND + ++L++W++ + LK LQ N+ + ++ K + + S + D
Sbjct: 2 NNDNLHDKLTIWRQQQIELKGMLQLIPKFQSLNEIRYVVGLDISFDKSSPKAVSALVIYD 61
Query: 579 AERRVLL 599
E+R+++
Sbjct: 62 LEQRMII 68
>SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 447 ENLKKRLQEAESNLKQNKQELHLLIEKV 530
E LKK LQE ++ L Q ++E+ L +K+
Sbjct: 295 EPLKKELQETKTLLAQKEEEISNLKDKL 322
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 316 RRMLSNLKNSWSL*MTLKNAKRLLNIKRITM 408
+++ + NS+ + T NAKRL ++R+TM
Sbjct: 1069 KKLFLEVLNSYFMSNTDSNAKRLQQLRRMTM 1099
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -3
Query: 422 FWYCVIVILFIFKSLFAFFNVIYKDQLFFKFDNILRFNFFH 300
F+ C I ++ S+F ++ Y + K + + FFH
Sbjct: 1289 FYPCPIAYTYVRNSIFLILSICYTINICVKVYGLSFYYFFH 1329
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 25.0 bits (52), Expect = 9.7
Identities = 19/98 (19%), Positives = 41/98 (41%)
Frame = +3
Query: 336 KKQLVFIDDIKKCKKTFEYKKNNNDTVPEELSVWKEYENLKKRLQEAESNLKQNKQELHL 515
K ++ D + ++ + KK + + +E ENL+ L+ + L +++ E+
Sbjct: 110 KAEIYNRDALNTKQEHLDIKKRLEKSDETVCKLKEENENLQDMLRNVGNELVESRDEIKE 169
Query: 516 LIEKVSTKLTQRKESQCHVQDAERRVLLLQKVSEQLQS 629
LIEK + K + + +L + S+ S
Sbjct: 170 LIEKQKVQKESVKSHESELSSVMSSEILPKASSDSAGS 207
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 354 IDDIKKCKKTFEYKKNNNDTVPEELSVWKEYENLKKRLQEAES 482
+DD ++FE KK + + +EL V E+L+ R+ + S
Sbjct: 344 VDDPNSANQSFESKKASINLEGKELMVKARIEDLEVRINKITS 386
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 25.0 bits (52), Expect = 9.7
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +3
Query: 360 DIKKCKKTFEYKKNNNDTVPEELSVWKEYENLKKRLQEAESNLKQNKQELHLLIEKVSTK 539
DIK ++TF++++N E+L W +EN + +A ++ + ++ L+ I K +
Sbjct: 199 DIKN-EETFKFRENVALETLEDLLHWMIHENGVIGILDATNSTHERRKHLYDRISKEADI 257
Query: 540 LTQRKESQC 566
ES C
Sbjct: 258 GIMFLESLC 266
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,485,348
Number of Sequences: 5004
Number of extensions: 50095
Number of successful extensions: 208
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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