Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H18
         (372 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68879-7|CAA93088.2|  207|Caenorhabditis elegans Hypothetical pr...    27   3.2  
AF010241-1|AAB65419.1|  207|Caenorhabditis elegans glutathione S...    27   3.2  
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z50794-6|CAA90659.2|  388|Caenorhabditis elegans Hypothetical pr...    26   7.5  
AL132860-1|CAB60513.2|  616|Caenorhabditis elegans Hypothetical ...    26   9.9  

>Z68879-7|CAA93088.2|  207|Caenorhabditis elegans Hypothetical
           protein K08F4.11 protein.
          Length = 207

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 113 DKFSGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELGRDTPVCTF 289
           +KFS L+  +      +L  D   +S+     RY       + Q+ ++EL  D  V TF
Sbjct: 37  EKFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARKFGFVGQTAEEELQADEVVDTF 95


>AF010241-1|AAB65419.1|  207|Caenorhabditis elegans glutathione
           S-transferase protein.
          Length = 207

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 113 DKFSGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELGRDTPVCTF 289
           +KFS L+  +      +L  D   +S+     RY       + Q+ ++EL  D  V TF
Sbjct: 37  EKFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARKFGFVGQTAEEELQADEVVDTF 95


>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
           protein F54F11.2 protein.
          Length = 1589

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 119 FSGLQGCYIREFDGVLPFDSVTYSKEA 199
           F+ +  C + E+ G  P D  TY   A
Sbjct: 691 FTNMAQCVVNEYSGFCPLDKATYGSAA 717


>Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical
           protein C25F9.5 protein.
          Length = 707

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = -1

Query: 318 IMLGFSSALVKV--HTGVSLPSSSLHDWCMTASCAQKYRVH 202
           I  GFS A  K   H    L  S +H WC+T     ++  H
Sbjct: 343 IFYGFSLANAKCNQHYQKLLQLSVMHRWCLTEENTHRFSAH 383


>Z50794-6|CAA90659.2|  388|Caenorhabditis elegans Hypothetical
           protein F59F5.5 protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 116 KFSGLQGCYIREFDGVLPFDSVTYSKEAECTRYFC 220
           K   L  CY     G  PF    + K + C  ++C
Sbjct: 207 KHENLHYCYALMHKGYKPFGQEVFKKSSTCEGHYC 241


>AL132860-1|CAB60513.2|  616|Caenorhabditis elegans Hypothetical
           protein Y56A3A.2 protein.
          Length = 616

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 155 DGVLPFDSVTYSKEAECTRYFCAHDAVIHQ 244
           D  LP+  V   +E + T+Y C H   + Q
Sbjct: 433 DDALPYGGVAQPEEKKITKYSCLHARYVVQ 462


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,701,592
Number of Sequences: 27780
Number of extensions: 144404
Number of successful extensions: 280
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)