Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_H12
(749 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processi... 223 5e-58
BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processi... 223 5e-58
BC107801-1|AAI07802.1| 383|Homo sapiens PRPF38B protein protein. 223 5e-58
BC040127-1|AAH40127.1| 303|Homo sapiens PRPF38B protein protein. 223 5e-58
BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for IM... 223 5e-58
BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for IM... 223 5e-58
BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein. 223 5e-58
AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processi... 223 5e-58
AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processi... 223 5e-58
AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens ... 221 2e-57
BC053838-1|AAH53838.1| 190|Homo sapiens PRPF38B protein protein. 179 9e-45
AL591719-4|CAH72068.1| 190|Homo sapiens PRP38 pre-mRNA processi... 179 9e-45
AL160171-5|CAI12932.1| 190|Homo sapiens PRP38 pre-mRNA processi... 179 9e-45
AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processi... 113 6e-25
AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processi... 113 6e-25
BC034581-1|AAH34581.1| 93|Homo sapiens PRPF38B protein protein. 93 7e-19
>BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 223 bits (545), Expect = 5e-58
Identities = 105/190 (55%), Positives = 123/190 (64%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXPRAGGGASTTIGALVRQMLVKLDWFX 717
YIRALGFMYIRYTQPP DL +AGGG TIG ++R L KL+WF
Sbjct: 156 YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS 215
Query: 718 TLFPRIPVPI 747
TLFPRIPVP+
Sbjct: 216 TLFPRIPVPV 225
>BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 223 bits (545), Expect = 5e-58
Identities = 105/190 (55%), Positives = 123/190 (64%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXPRAGGGASTTIGALVRQMLVKLDWFX 717
YIRALGFMYIRYTQPP DL +AGGG TIG ++R L KL+WF
Sbjct: 156 YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS 215
Query: 718 TLFPRIPVPI 747
TLFPRIPVP+
Sbjct: 216 TLFPRIPVPV 225
>BC107801-1|AAI07802.1| 383|Homo sapiens PRPF38B protein protein.
Length = 383
Score = 223 bits (545), Expect = 5e-58
Identities = 105/190 (55%), Positives = 123/190 (64%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXPRAGGGASTTIGALVRQMLVKLDWFX 717
YIRALGFMYIRYTQPP DL +AGGG TIG ++R L KL+WF
Sbjct: 156 YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS 215
Query: 718 TLFPRIPVPI 747
TLFPRIPVP+
Sbjct: 216 TLFPRIPVPV 225
>BC040127-1|AAH40127.1| 303|Homo sapiens PRPF38B protein protein.
Length = 303
Score = 223 bits (545), Expect = 5e-58
Identities = 105/190 (55%), Positives = 123/190 (64%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXPRAGGGASTTIGALVRQMLVKLDWFX 717
YIRALGFMYIRYTQPP DL +AGGG TIG ++R L KL+WF
Sbjct: 156 YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS 215
Query: 718 TLFPRIPVPI 747
TLFPRIPVP+
Sbjct: 216 TLFPRIPVPV 225
>BC024275-1|AAH24275.1| 465|Homo sapiens Unknown (protein for
IMAGE:4122390) protein.
Length = 465
Score = 223 bits (545), Expect = 5e-58
Identities = 105/190 (55%), Positives = 123/190 (64%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXPRAGGGASTTIGALVRQMLVKLDWFX 717
YIRALGFMYIRYTQPP DL +AGGG TIG ++R L KL+WF
Sbjct: 156 YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS 215
Query: 718 TLFPRIPVPI 747
TLFPRIPVP+
Sbjct: 216 TLFPRIPVPV 225
>BC016296-1|AAH16296.1| 474|Homo sapiens Unknown (protein for
IMAGE:3538108) protein.
Length = 474
Score = 223 bits (545), Expect = 5e-58
Identities = 105/190 (55%), Positives = 123/190 (64%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXPRAGGGASTTIGALVRQMLVKLDWFX 717
YIRALGFMYIRYTQPP DL +AGGG TIG ++R L KL+WF
Sbjct: 156 YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS 215
Query: 718 TLFPRIPVPI 747
TLFPRIPVP+
Sbjct: 216 TLFPRIPVPV 225
>BC007757-1|AAH07757.1| 465|Homo sapiens PRPF38B protein protein.
Length = 465
Score = 223 bits (545), Expect = 5e-58
Identities = 105/190 (55%), Positives = 123/190 (64%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXPRAGGGASTTIGALVRQMLVKLDWFX 717
YIRALGFMYIRYTQPP DL +AGGG TIG ++R L KL+WF
Sbjct: 156 YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS 215
Query: 718 TLFPRIPVPI 747
TLFPRIPVP+
Sbjct: 216 TLFPRIPVPV 225
>AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 223 bits (545), Expect = 5e-58
Identities = 105/190 (55%), Positives = 123/190 (64%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXPRAGGGASTTIGALVRQMLVKLDWFX 717
YIRALGFMYIRYTQPP DL +AGGG TIG ++R L KL+WF
Sbjct: 156 YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS 215
Query: 718 TLFPRIPVPI 747
TLFPRIPVP+
Sbjct: 216 TLFPRIPVPV 225
>AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 223 bits (545), Expect = 5e-58
Identities = 105/190 (55%), Positives = 123/190 (64%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXPRAGGGASTTIGALVRQMLVKLDWFX 717
YIRALGFMYIRYTQPP DL +AGGG TIG ++R L KL+WF
Sbjct: 156 YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS 215
Query: 718 TLFPRIPVPI 747
TLFPRIPVP+
Sbjct: 216 TLFPRIPVPV 225
>AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ10330 fis, clone NT2RM2000624, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 546
Score = 221 bits (540), Expect = 2e-57
Identities = 104/190 (54%), Positives = 123/190 (64%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WG+E+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGSEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADLXXXXXXXXXXXXXXXPRAGGGASTTIGALVRQMLVKLDWFX 717
YIRALGFMYIRYTQPP DL +AGGG TIG ++R L KL+WF
Sbjct: 156 YIRALGFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFS 215
Query: 718 TLFPRIPVPI 747
TLFPRIPVP+
Sbjct: 216 TLFPRIPVPV 225
>BC053838-1|AAH53838.1| 190|Homo sapiens PRPF38B protein protein.
Length = 190
Score = 179 bits (436), Expect = 9e-45
Identities = 83/139 (59%), Positives = 96/139 (69%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADL 594
YIRALGFMYIRYTQPP DL
Sbjct: 156 YIRALGFMYIRYTQPPTDL 174
>AL591719-4|CAH72068.1| 190|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 190
Score = 179 bits (436), Expect = 9e-45
Identities = 83/139 (59%), Positives = 96/139 (69%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADL 594
YIRALGFMYIRYTQPP DL
Sbjct: 156 YIRALGFMYIRYTQPPTDL 174
>AL160171-5|CAI12932.1| 190|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 190
Score = 179 bits (436), Expect = 9e-45
Identities = 83/139 (59%), Positives = 96/139 (69%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQVKH 357
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++V H
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTH 95
Query: 358 LEPWERGSRKTSXXXXXXXXXXXXXXXXXXSTAFCXXXXXXXXXXXXXQVNGLLQHTDSP 537
+EPWE+GSRKT+ STAFC QV GL+ HTDSP
Sbjct: 96 VEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSP 155
Query: 538 YIRALGFMYIRYTQPPADL 594
YIRALGFMYIRYTQPP DL
Sbjct: 156 YIRALGFMYIRYTQPPTDL 174
>AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 113 bits (272), Expect = 6e-25
Identities = 54/100 (54%), Positives = 60/100 (60%)
Frame = +1
Query: 448 STAFCXXXXXXXXXXXXXQVNGLLQHTDSPYIRALGFMYIRYTQPPADLXXXXXXXXXXX 627
STAFC QV GL+ HTDSPYIRALGFMYIRYTQPP DL
Sbjct: 15 STAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFESFLDDE 74
Query: 628 XXXXPRAGGGASTTIGALVRQMLVKLDWFXTLFPRIPVPI 747
+AGGG TIG ++R L KL+WF TLFPRIPVP+
Sbjct: 75 EDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPV 114
>AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 113 bits (272), Expect = 6e-25
Identities = 54/100 (54%), Positives = 60/100 (60%)
Frame = +1
Query: 448 STAFCXXXXXXXXXXXXXQVNGLLQHTDSPYIRALGFMYIRYTQPPADLXXXXXXXXXXX 627
STAFC QV GL+ HTDSPYIRALGFMYIRYTQPP DL
Sbjct: 15 STAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFESFLDDE 74
Query: 628 XXXXPRAGGGASTTIGALVRQMLVKLDWFXTLFPRIPVPI 747
+AGGG TIG ++R L KL+WF TLFPRIPVP+
Sbjct: 75 EDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPV 114
>BC034581-1|AAH34581.1| 93|Homo sapiens PRPF38B protein protein.
Length = 93
Score = 93.5 bits (222), Expect = 7e-19
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +1
Query: 178 KSSKTGKQHNVLPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYHEVVDEIYYQ 348
K + +GKQ NVLP+WGNE+TMNLNP+IL NI S YFKV L++LKTYHEVVDEIY++
Sbjct: 36 KPAVSGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFK 92
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,569,312
Number of Sequences: 237096
Number of extensions: 1823092
Number of successful extensions: 3527
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3502
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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