Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H11
         (792 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0539 - 10408398-10409552                                         31   1.4  
06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255           30   1.8  
01_07_0203 - 41968071-41968154,41969499-41969858,41969946-41970248     29   5.6  
08_01_0655 + 5646567-5646650,5646675-5647697,5648227-5648382,564...    28   7.4  
08_02_1343 - 26274788-26275019,26275972-26276611,26277174-262783...    28   9.8  
08_02_0023 + 11342173-11342249,11342496-11342736                       28   9.8  
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083...    28   9.8  

>09_02_0539 - 10408398-10409552
          Length = 384

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = +3

Query: 204 ENSSACG-EXAPVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFL 380
           ENS++   + AP++L ++N +    +S+ D+D +  G     D   +  F   +D ++ +
Sbjct: 9   ENSTSLDHKLAPMLLFHYNYDMSLEESDDDQDNEESGDD--EDVSDEDEFTEASDDEESM 66

Query: 381 SESELKDFTNQYISITPISTNSSDHDEAKHE 473
            E++  +        T  S+N +D D A  E
Sbjct: 67  EETDDDE--------TDASSNDNDDDTANDE 89


>06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255
          Length = 863

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +3

Query: 282 NTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSE-SELKDFTNQYISITPISTNSSDHD 458
           N+D     +G+S +   EQ T   P N    FL E  EL       +S  P     SD  
Sbjct: 592 NSDVMFPAEGVSKMQALEQLTGLLPFNQPVSFLKELGELTKLRVLAVSWIPDHVRDSDEA 651

Query: 459 EAKHEYDF 482
            A+HE  +
Sbjct: 652 HAEHEKSY 659


>01_07_0203 - 41968071-41968154,41969499-41969858,41969946-41970248
          Length = 248

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +3

Query: 636 TIPVSVNKILSNLYKLQEENAYLRNKLXELTGTLNLQKKPVLSKSAIHHE 785
           +IP +V+++L  + +LQ++   L  K  ELT T     KP +  S +  E
Sbjct: 105 SIPTTVSRVLKYIPELQKQVENLERKKKELTTTSTTNCKPGVLGSQLMSE 154


>08_01_0655 +
           5646567-5646650,5646675-5647697,5648227-5648382,
           5648499-5648529,5648636-5648808
          Length = 488

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +3

Query: 255 NSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESEL 395
           N       S  D D D+D +S  S CE        +D++Q +   E+
Sbjct: 266 NGSEDGEGSLNDSDYDSDAVSDASTCEYSEIANNYDDEKQLVEHDEV 312


>08_02_1343 -
           26274788-26275019,26275972-26276611,26277174-26278367,
           26278515-26278701
          Length = 750

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -1

Query: 570 HYPTL*YLEQYSIFCFFCEHMFCACYYHLKNHIHVLLHHDHYYWL 436
           H+  L Y + +  +CF CE     CY+    H  V++ ++  Y++
Sbjct: 172 HWVALVYKKPHVAYCFACEE----CYFIRTEHFGVVMDNEDDYFI 212


>08_02_0023 + 11342173-11342249,11342496-11342736
          Length = 105

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +3

Query: 648 SVNKILSNLYKLQEENAYLRNKLXEL 725
           SV+KI S + KLQ+EN  LR +  EL
Sbjct: 42  SVHKIASQVKKLQKENIELRGRNAEL 67


>05_07_0354 -
           29507068-29507170,29507406-29507431,29508264-29508301,
           29508722-29508825,29509005-29509024,29509251-29509299,
           29510319-29510406,29510463-29510562,29510660-29510737,
           29512688-29512804,29513718-29513821,29514497-29514569,
           29514904-29514981,29515091-29515215,29515278-29515341,
           29515439-29515597,29515950-29516048,29516496-29516624,
           29517010-29517075,29517160-29517304,29517379-29517500,
           29517683-29517838,29517918-29518029,29518891-29519036,
           29519148-29519252,29519391-29519540,29519703-29519776,
           29519902-29520055,29520142-29520408
          Length = 1016

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 651 VNKILSNLYKLQEENAYLRNKLXELTGTLNLQKK 752
           + K+L    +L++E A +R K  E+T T+  +KK
Sbjct: 607 LKKLLKEQRQLEDEAAKIRRKKEEITDTMMFEKK 640


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,049,118
Number of Sequences: 37544
Number of extensions: 266426
Number of successful extensions: 712
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)