Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H11
         (792 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2333|AAN09385.1|  502|Drosophila melanogaster CG9216-PB...    36   0.048
AE014298-2332|AAF48567.2| 1520|Drosophila melanogaster CG9216-PC...    36   0.048
AE014298-2331|AAF48565.1| 1520|Drosophila melanogaster CG9216-PA...    36   0.048
AY069515-1|AAL39660.1|  620|Drosophila melanogaster LD23533p pro...    31   1.4  
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h...    31   1.4  
AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington d...    31   1.4  
AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington d...    31   1.4  
AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA...    31   1.4  
AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB...    31   1.4  
AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA...    31   1.4  
BT003314-1|AAO25074.1| 1430|Drosophila melanogaster GH02877p pro...    30   3.2  
AE014134-1128|AAF52413.2| 1257|Drosophila melanogaster CG11098-P...    30   3.2  
AE014134-1127|AAF52414.2| 1430|Drosophila melanogaster CG11098-P...    30   3.2  
AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p pro...    30   4.2  
AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC ...    30   4.2  
AE014298-2417|AAF48618.2|  639|Drosophila melanogaster CG9906-PA...    29   7.3  
AY070925-1|AAL48547.1|  183|Drosophila melanogaster RE03006p pro...    29   9.6  
AE014298-1639|AAF48059.1|  183|Drosophila melanogaster CG1558-PA...    29   9.6  

>AE014298-2333|AAN09385.1|  502|Drosophila melanogaster CG9216-PB,
           isoform B protein.
          Length = 502

 Score = 36.3 bits (80), Expect = 0.048
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
 Frame = +3

Query: 246 KNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNND-QQQFLSESELKDF-TNQYI 419
           KN    R A + +   D+ +DGISIISDCE      PN   ++  L +    D  T+   
Sbjct: 70  KNERCNRPAAE-DPQADDISDGISIISDCESTDRISPNLFLREPLLGDMGFGDLPTSPVE 128

Query: 420 SITPISTNS--SDHDEAKHE 473
            I PIST+   S++ E + E
Sbjct: 129 LIAPISTDQQLSEYPEREPE 148


>AE014298-2332|AAF48567.2| 1520|Drosophila melanogaster CG9216-PC,
            isoform C protein.
          Length = 1520

 Score = 36.3 bits (80), Expect = 0.048
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
 Frame = +3

Query: 246  KNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNND-QQQFLSESELKDF-TNQYI 419
            KN    R A + +   D+ +DGISIISDCE      PN   ++  L +    D  T+   
Sbjct: 1088 KNERCNRPAAE-DPQADDISDGISIISDCESTDRISPNLFLREPLLGDMGFGDLPTSPVE 1146

Query: 420  SITPISTNS--SDHDEAKHE 473
             I PIST+   S++ E + E
Sbjct: 1147 LIAPISTDQQLSEYPEREPE 1166


>AE014298-2331|AAF48565.1| 1520|Drosophila melanogaster CG9216-PA,
            isoform A protein.
          Length = 1520

 Score = 36.3 bits (80), Expect = 0.048
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
 Frame = +3

Query: 246  KNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNND-QQQFLSESELKDF-TNQYI 419
            KN    R A + +   D+ +DGISIISDCE      PN   ++  L +    D  T+   
Sbjct: 1088 KNERCNRPAAE-DPQADDISDGISIISDCESTDRISPNLFLREPLLGDMGFGDLPTSPVE 1146

Query: 420  SITPISTNS--SDHDEAKHE 473
             I PIST+   S++ E + E
Sbjct: 1147 LIAPISTDQQLSEYPEREPE 1166


>AY069515-1|AAL39660.1|  620|Drosophila melanogaster LD23533p
           protein.
          Length = 620

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 276 DSNTDKDEDTDGISIIS-DCEQDTAFEPNNDQQQFLSESELKDFTNQYISITPISTNSSD 452
           D + D D+D D + ++S +C+  T     N+QQQ LS + LK  T    S    +T+  D
Sbjct: 500 DDDDDDDDDDDDMELLSAECDDFTTLSQLNEQQQALS-AALKLPTTTAASSGGAATSQDD 558


>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
           homolog protein.
          Length = 3584

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 276 DSNTDKDEDTDGISIIS-DCEQDTAFEPNNDQQQFLSESELKDFTNQYISITPISTNSSD 452
           D + D D+D D + ++S +C+  T     N+QQQ LS + LK  T    S    +T+  D
Sbjct: 500 DDDDDDDDDDDDMELLSAECDDFTTLSQLNEQQQALS-AALKLPTTTAASSGGAATSQDD 558


>AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington
           disease protein homolog protein.
          Length = 3583

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 276 DSNTDKDEDTDGISIIS-DCEQDTAFEPNNDQQQFLSESELKDFTNQYISITPISTNSSD 452
           D + D D+D D + ++S +C+  T     N+QQQ LS + LK  T    S    +T+  D
Sbjct: 500 DDDDDDDDDDDDMELLSAECDDFTTLSQLNEQQQALS-AALKLPTTTAASSGGAATSQDD 558


>AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington
           disease protein homolog protein.
          Length = 3583

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 276 DSNTDKDEDTDGISIIS-DCEQDTAFEPNNDQQQFLSESELKDFTNQYISITPISTNSSD 452
           D + D D+D D + ++S +C+  T     N+QQQ LS + LK  T    S    +T+  D
Sbjct: 500 DDDDDDDDDDDDMELLSAECDDFTTLSQLNEQQQALS-AALKLPTTTAASSGGAATSQDD 558


>AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA
           protein.
          Length = 3583

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 276 DSNTDKDEDTDGISIIS-DCEQDTAFEPNNDQQQFLSESELKDFTNQYISITPISTNSSD 452
           D + D D+D D + ++S +C+  T     N+QQQ LS + LK  T    S    +T+  D
Sbjct: 500 DDDDDDDDDDDDMELLSAECDDFTTLSQLNEQQQALS-AALKLPTTTAASSGGAATSQDD 558


>AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB,
            isoform B protein.
          Length = 4685

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 273  VDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELKD 401
            V  N   ++D D  +   D EQ+  +EP  D+ Q L E + KD
Sbjct: 1060 VADNAPSEDDEDDDTATVDYEQELRWEPREDRAQELQERKKKD 1102


>AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA,
            isoform A protein.
          Length = 4543

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 273  VDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELKD 401
            V  N   ++D D  +   D EQ+  +EP  D+ Q L E + KD
Sbjct: 976  VADNAPSEDDEDDDTATVDYEQELRWEPREDRAQELQERKKKD 1018


>BT003314-1|AAO25074.1| 1430|Drosophila melanogaster GH02877p
           protein.
          Length = 1430

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 20/82 (24%), Positives = 34/82 (41%)
 Frame = +3

Query: 225 EXAPVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELKDF 404
           E  P + +  N+E +  D     D++TD  S     + ++  E  ND +      ELK  
Sbjct: 266 EKPPPLPQAINAELEDADDFDYGDDETDDDSQQGSQDNESIVEIANDNKSINESIELKPL 325

Query: 405 TNQYISITPISTNSSDHDEAKH 470
           +   +  T    +S D  + KH
Sbjct: 326 SVAQLKKTDKVEDSKDETKEKH 347


>AE014134-1128|AAF52413.2| 1257|Drosophila melanogaster CG11098-PB,
           isoform B protein.
          Length = 1257

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 20/82 (24%), Positives = 34/82 (41%)
 Frame = +3

Query: 225 EXAPVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELKDF 404
           E  P + +  N+E +  D     D++TD  S     + ++  E  ND +      ELK  
Sbjct: 266 EKPPPLPQAINAELEDADDFDYGDDETDDDSQQGSQDNESIVEIANDNKSINESIELKPL 325

Query: 405 TNQYISITPISTNSSDHDEAKH 470
           +   +  T    +S D  + KH
Sbjct: 326 SVAQLKKTDKVEDSKDETKEKH 347


>AE014134-1127|AAF52414.2| 1430|Drosophila melanogaster CG11098-PA,
           isoform A protein.
          Length = 1430

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 20/82 (24%), Positives = 34/82 (41%)
 Frame = +3

Query: 225 EXAPVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELKDF 404
           E  P + +  N+E +  D     D++TD  S     + ++  E  ND +      ELK  
Sbjct: 266 EKPPPLPQAINAELEDADDFDYGDDETDDDSQQGSQDNESIVEIANDNKSINESIELKPL 325

Query: 405 TNQYISITPISTNSSDHDEAKH 470
           +   +  T    +S D  + KH
Sbjct: 326 SVAQLKKTDKVEDSKDETKEKH 347


>AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p
           protein.
          Length = 1775

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 651 VNKILSNLYKLQEENAYLRNKLXELTGTLNLQKKPVLSKSAIHHE 785
           + K   NL K  ++NA L  K+ ELT  L  Q++ V  K  +  E
Sbjct: 79  LKKYALNLKKRTQDNADLEQKVQELTSQLQEQQELVKQKEEVERE 123


>AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC
            protein.
          Length = 2779

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 651  VNKILSNLYKLQEENAYLRNKLXELTGTLNLQKKPVLSKSAIHHE 785
            + K   NL K  ++NA L  K+ ELT  L  Q++ V  K  +  E
Sbjct: 1083 LKKYALNLKKRTQDNADLEQKVQELTSQLQEQQELVKQKEEVERE 1127


>AE014298-2417|AAF48618.2|  639|Drosophila melanogaster CG9906-PA
           protein.
          Length = 639

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
 Frame = +3

Query: 261 ERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELKDFTNQY---ISITP 431
           E +  +    K+E+ D    + DCE++   E  +D+++  ++      TN+    +S +P
Sbjct: 547 EEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEK--TDERAAGDTNKESTPLSASP 604

Query: 432 ISTNSSDHDEAKHEYDFLGDNNKHKTYVHRRNKRL 536
                S  D  + E D L   NK  T   R+ K L
Sbjct: 605 KKNQKSYLDNNEDEEDTL--KNKEPTPKKRKRKAL 637


>AY070925-1|AAL48547.1|  183|Drosophila melanogaster RE03006p
           protein.
          Length = 183

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +3

Query: 345 AFEPNNDQQQFLSES-ELKDFTNQYISITPISTNSSDHDEAKHEYDFLGDNNKHKTYVHR 521
           +F+PN +QQ++L +   L++F    ++     TN++   +A+HE       N    Y+  
Sbjct: 111 SFKPNKEQQRYLDQGPNLQNFVRSSLAF----TNAAIRFQAEHEDMMELQCNMDDHYLFM 166

Query: 522 RNKRLSTVLN 551
           RN  ++  ++
Sbjct: 167 RNTMINNAIH 176


>AE014298-1639|AAF48059.1|  183|Drosophila melanogaster CG1558-PA
           protein.
          Length = 183

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +3

Query: 345 AFEPNNDQQQFLSES-ELKDFTNQYISITPISTNSSDHDEAKHEYDFLGDNNKHKTYVHR 521
           +F+PN +QQ++L +   L++F    ++     TN++   +A+HE       N    Y+  
Sbjct: 111 SFKPNKEQQRYLDQGPNLQNFVRSSLAF----TNAAIRFQAEHEDMMELQCNMDDHYLFM 166

Query: 522 RNKRLSTVLN 551
           RN  ++  ++
Sbjct: 167 RNTMINNAIH 176


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,215,110
Number of Sequences: 53049
Number of extensions: 517289
Number of successful extensions: 1588
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1587
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)