Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_H11
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 36 0.033
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 36 0.033
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 36 0.033
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 33 0.23
U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical pr... 33 0.31
U97196-6|AAB52455.1| 373|Caenorhabditis elegans Hypothetical pr... 31 0.94
AJ012357-1|CAB41352.1| 371|Caenorhabditis elegans cyclic AMP-de... 31 1.2
Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical p... 28 6.7
AC024761-2|AAF59463.1| 174|Caenorhabditis elegans Hypothetical ... 28 6.7
Z98866-18|CAB11555.2| 387|Caenorhabditis elegans Hypothetical p... 28 8.8
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 28 8.8
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 35.9 bits (79), Expect = 0.033
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +3
Query: 441 NSSDHDEAKHEYDFLGDNNKHKTYVHRRNKRLSTV-LNIIM--LGSVITAAGVAIGHMWG 611
N + D KH + L V K +S V LN+ L + AA + ++ G
Sbjct: 313 NLAHADAIKHRDEELAQTRAELVKVTEMMKSMSDVKLNVSEEELSELAPAAAETVRYLRG 372
Query: 612 AKNECSTNTIPVSVNKILSNLYKLQEENAYLRNKLXELTGTLNLQKKPVLSKSAIHHE 785
+ S +++ + ++ L +++E+N LRN L EL T++ K ++S+ + E
Sbjct: 373 GQ---SLSSLVLEHARVRGKLTEVEEDNVNLRNTLEELLETIDQNKPQMISQKMVTDE 427
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 35.9 bits (79), Expect = 0.033
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +3
Query: 441 NSSDHDEAKHEYDFLGDNNKHKTYVHRRNKRLSTV-LNIIM--LGSVITAAGVAIGHMWG 611
N + D KH + L V K +S V LN+ L + AA + ++ G
Sbjct: 313 NLAHADAIKHRDEELAQTRAELVKVTEMMKSMSDVKLNVSEEELSELAPAAAETVRYLRG 372
Query: 612 AKNECSTNTIPVSVNKILSNLYKLQEENAYLRNKLXELTGTLNLQKKPVLSKSAIHHE 785
+ S +++ + ++ L +++E+N LRN L EL T++ K ++S+ + E
Sbjct: 373 GQ---SLSSLVLEHARVRGKLTEVEEDNVNLRNTLEELLETIDQNKPQMISQKMVTDE 427
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 35.9 bits (79), Expect = 0.033
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +3
Query: 441 NSSDHDEAKHEYDFLGDNNKHKTYVHRRNKRLSTV-LNIIM--LGSVITAAGVAIGHMWG 611
N + D KH + L V K +S V LN+ L + AA + ++ G
Sbjct: 313 NLAHADAIKHRDEELAQTRAELVKVTEMMKSMSDVKLNVSEEELSELAPAAAETVRYLRG 372
Query: 612 AKNECSTNTIPVSVNKILSNLYKLQEENAYLRNKLXELTGTLNLQKKPVLSKSAIHHE 785
+ S +++ + ++ L +++E+N LRN L EL T++ K ++S+ + E
Sbjct: 373 GQ---SLSSLVLEHARVRGKLTEVEEDNVNLRNTLEELLETIDQNKPQMISQKMVTDE 427
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 279 SNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELKDFTNQYISITP 431
SN ++DED DG+ I D + N Q+ LS E+KD + + +TP
Sbjct: 763 SNEEEDEDIDGVMITDDTTSE------NLQRDSLSPGEIKDKESSFTVLTP 807
>U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical
protein F47F2.1b protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 264 RQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELKDFTNQYISITP 431
R+ + S+T E + S ++C F+ NN+ + +EL + T+ +SITP
Sbjct: 25 RRLMSSSTSSVESVEDESCSNECSASFTFDTNNNSRGNNQVNELAEETHMKLSITP 80
>U97196-6|AAB52455.1| 373|Caenorhabditis elegans Hypothetical
protein B0207.7 protein.
Length = 373
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 402 FTNQYISITPISTNSSDHDEAKHEYDFLGDNNKHKTYVH 518
F+ +Y+ + P STN+ H A+ F+G +N TY H
Sbjct: 166 FSRKYLELDP-STNTMRHRAARKTPGFMGTSNYCSTYAH 203
>AJ012357-1|CAB41352.1| 371|Caenorhabditis elegans cyclic
AMP-dependent protein kinase,catalytic subunit protein.
Length = 371
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 273 VDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELKDFTNQYISITP 431
+ S+T E + S ++C F+ NN+ + +EL + T+ +SITP
Sbjct: 1 MSSSTSSVESVEDESCSNECSASFTFDTNNNSRGNNQVNELAEETHMKLSITP 53
>Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical
protein F59B2.11 protein.
Length = 590
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 261 ERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELK--DFTNQYISITPI 434
ER++++ N +E+T+G + + +T E NN ES L + T++ + I
Sbjct: 389 ERESLNDNESSNEETEGRRSVK--KTNTLNEDNNG-NSIRKESNLSNDEETDEVVDTHRI 445
Query: 435 STNSSDHDEAK 467
+T + DE K
Sbjct: 446 NTEDDEEDEEK 456
>AC024761-2|AAF59463.1| 174|Caenorhabditis elegans Hypothetical
protein Y38C1AA.9 protein.
Length = 174
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 686 RGKCIFEK*TXRVNRDLKFAKKTCVEQICXTSR 784
RG C+ K T L F+ KTC E +C ++R
Sbjct: 110 RGTCLGTKKTFLCACQLGFSGKTCEETVCDSAR 142
>Z98866-18|CAB11555.2| 387|Caenorhabditis elegans Hypothetical
protein Y49E10.21 protein.
Length = 387
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 237 VILKNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAF--EPNNDQQQFLSESELKDFTN 410
V+ ++ + +R A+ S D +D SI + + +PN Q + L +SEL++F+N
Sbjct: 104 VLEESLSEKRLAILSTIDSAHISDIKSIKTPVKSILKLLEDPNKLQLRILVQSELREFSN 163
Query: 411 QYISI 425
I I
Sbjct: 164 SAIEI 168
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/91 (20%), Positives = 33/91 (36%)
Frame = +3
Query: 234 PVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELKDFTNQ 413
P L+ +++ +D+D D D E EP+ Q+ E KD +
Sbjct: 187 PRELRKLKKQQKTAKVEVVEDDDDDDDEDDDDVEAPAPQEPSRKQKAHNQREEKKDKNKK 246
Query: 414 YISITPISTNSSDHDEAKHEYDFLGDNNKHK 506
Y + D D+ + D D++ K
Sbjct: 247 YQPVKEEPDLDDDDDDEDDDDDDGDDDDDEK 277
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/91 (20%), Positives = 33/91 (36%)
Frame = +3
Query: 234 PVILKNFNSERQAVDSNTDKDEDTDGISIISDCEQDTAFEPNNDQQQFLSESELKDFTNQ 413
P L+ +++ +D+D D D E EP+ Q+ E KD +
Sbjct: 187 PRELRKLKKQQKTAKVEVVEDDDDDDDEDDDDVEAPAPQEPSRKQKAHNQREEKKDKNKK 246
Query: 414 YISITPISTNSSDHDEAKHEYDFLGDNNKHK 506
Y + D D+ + D D++ K
Sbjct: 247 YQPVKEEPDLDDDDDDEDDDDDDGDDDDDEK 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,923,329
Number of Sequences: 27780
Number of extensions: 276456
Number of successful extensions: 879
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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