Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H10
         (784 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    26   1.5  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.6  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    25   2.6  
EF426146-1|ABO26389.1|   97|Anopheles gambiae unknown protein.         24   6.1  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +2

Query: 416 VPYPLRMKPVTKFRYFQVREQWRLTDFLFNPMVVMMVLPLFLIMILPKMMNDPE-TKEDL 592
           +P+  R+K +       V   +    +LF+  +V+ VL +  IM+  ++  DPE  K D+
Sbjct: 132 IPWESRIKEIESHFGSVVASYFTFLRWLFSVNIVISVLLVVFIMVPEEIYVDPEKAKCDI 191

Query: 593 KQ 598
           ++
Sbjct: 192 RK 193


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 654 LVNISDISGTSDIFARLLICFKSSLVSGSFIILGRIMI 541
           L+N+SDIS +S+   ++L   K S   G   I   ++I
Sbjct: 462 LINLSDISVSSETVVQVLFGLKRSFTPGPDGIPASVLI 499


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +3

Query: 177 KIPTTAIGNWTPAFTLTEAN--TSVLSEK 257
           +I    IG W PAF +T A   T +++E+
Sbjct: 305 RIAAPGIGCWNPAFDVTPAELITGIITER 333


>EF426146-1|ABO26389.1|   97|Anopheles gambiae unknown protein.
          Length = 97

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 299 VVEIVHPDYMYEPVRVEINSKGKYRARKVNYV 394
           ++ I  P Y  EP+RVE   +  YR + +  V
Sbjct: 23  MIRIKRPRYTPEPLRVEDALRDPYRVKVLRKV 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,395
Number of Sequences: 2352
Number of extensions: 16498
Number of successful extensions: 54
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)