BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_H10
(784 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-2162|AAF58075.1| 245|Drosophila melanogaster CG8397-PA... 222 5e-58
AY058342-1|AAL13571.1| 623|Drosophila melanogaster GH11762p pro... 31 1.8
AE014298-2074|AAF48401.1| 623|Drosophila melanogaster CG9512-PA... 31 1.8
AE014296-3165|AAF49150.3| 1242|Drosophila melanogaster CG9299-PA... 30 3.1
AY071510-1|AAL49132.1| 916|Drosophila melanogaster RE56564p pro... 30 4.1
AE014298-760|AAF46050.1| 916|Drosophila melanogaster CG11473-PA... 30 4.1
BT023810-1|AAZ66317.1| 388|Drosophila melanogaster RE24814p pro... 29 5.4
AY118533-1|AAM49902.1| 221|Drosophila melanogaster LD25803p pro... 29 5.4
AE014298-2075|AAF48402.1| 646|Drosophila melanogaster CG9509-PA... 29 5.4
BT024435-1|ABC86497.1| 93|Drosophila melanogaster IP02132p pro... 29 7.2
AY094822-1|AAM11175.1| 801|Drosophila melanogaster LD35927p pro... 29 9.5
AE014298-1122|AAS65281.1| 801|Drosophila melanogaster CG2258-PC... 29 9.5
AE014298-1121|AAS65280.1| 801|Drosophila melanogaster CG2258-PB... 29 9.5
AE014298-1120|AAF46320.1| 801|Drosophila melanogaster CG2258-PA... 29 9.5
>AE013599-2162|AAF58075.1| 245|Drosophila melanogaster CG8397-PA
protein.
Length = 245
Score = 222 bits (542), Expect = 5e-58
Identities = 95/175 (54%), Positives = 132/175 (75%)
Frame = +2
Query: 173 PEDPNNSNWQLDTRVHVNGGEYIGFVREDGTFVVHNLPSGSYVVEIVHPDYMYEPVRVEI 352
P + N W + + +N GE+ GFVREDG F++ +PSGSY++++ HPD YEPVRVEI
Sbjct: 58 PVNKNTPKWHTEITLSINDGEFKGFVREDGQFMISGVPSGSYILDVHHPDVFYEPVRVEI 117
Query: 353 NSKGKYRARKVNYVQTSQVIQVPYPLRMKPVTKFRYFQVREQWRLTDFLFNPMVVMMVLP 532
N KGK+RARKVN+VQ +Q++QV YPLR+KP+ F+YFQ REQW++TDFLF+PMV+MMVLP
Sbjct: 118 NPKGKFRARKVNFVQPAQIMQVAYPLRVKPLMPFKYFQTREQWKITDFLFSPMVLMMVLP 177
Query: 533 LFLIMILPKMMNDPETKEDLKQISNLAKISDVPEMSEMFTKIFNRGSVPKPTSSK 697
L L+++LPKM+NDPETK+++ + +D+PE+SEM T + G P+P K
Sbjct: 178 LLLMLVLPKMINDPETKKEIDNLQFPKMGNDMPEISEMLTSLLT-GKQPEPKEKK 231
>AY058342-1|AAL13571.1| 623|Drosophila melanogaster GH11762p
protein.
Length = 623
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 306 KSYTQTTCTNPCVSKSILKANTELEKSITFKLH 404
K Y T N V+KSIL AN E IT+ LH
Sbjct: 428 KGYVAATGFNDRVAKSILSANQETNTYITYLLH 460
>AE014298-2074|AAF48401.1| 623|Drosophila melanogaster CG9512-PA
protein.
Length = 623
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 306 KSYTQTTCTNPCVSKSILKANTELEKSITFKLH 404
K Y T N V+KSIL AN E IT+ LH
Sbjct: 428 KGYVAATGFNDRVAKSILSANQETNTYITYLLH 460
>AE014296-3165|AAF49150.3| 1242|Drosophila melanogaster CG9299-PA
protein.
Length = 1242
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 369 YLPLELISTRTGSYM*SGCTISTTYEPDGKLCTTNVPSSRTKPMYSPPLT 220
YLP T+ +Y G + S+ K+ T + PS + P Y+PP+T
Sbjct: 174 YLPPSPGITKVATYTSPGYSYSSASPGISKVATYSSPSLSSVPYYAPPVT 223
>AY071510-1|AAL49132.1| 916|Drosophila melanogaster RE56564p
protein.
Length = 916
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 312 TISTTYEPDGKLCTTNVPSSRTKPMYSPPLT*TRVSNCQLLLLGSSGGNT 163
TIS+T P + +T + SS T +SP T T + L L +SG +
Sbjct: 448 TISSTTIPSTTISSTTISSSTTFSPFSPSTTTTTTTTAAALNLETSGSES 497
>AE014298-760|AAF46050.1| 916|Drosophila melanogaster CG11473-PA
protein.
Length = 916
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 312 TISTTYEPDGKLCTTNVPSSRTKPMYSPPLT*TRVSNCQLLLLGSSGGNT 163
TIS+T P + +T + SS T +SP T T + L L +SG +
Sbjct: 448 TISSTTIPSTTISSTTISSSTTFSPFSPSTTTTTTTTAAALNLETSGSES 497
>BT023810-1|AAZ66317.1| 388|Drosophila melanogaster RE24814p
protein.
Length = 388
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 204 WTPAFTLTEANTSVLSE--KMGHLWCIIYRLVHTSSKSYTQTTCTNPCVSKSILKANTEL 377
+T ++ + T VL E K HL C+ L H +++ + T+P V IL +N
Sbjct: 181 FTKGLSIQDQYTEVLQEYLKDSHLLCVFVLLSHPAARGELRLKSTDPKV-PPILTSNYLT 239
Query: 378 EKSITFKLHKSFKYL 422
E L + +Y+
Sbjct: 240 ESEDVATLMRGIRYI 254
>AY118533-1|AAM49902.1| 221|Drosophila melanogaster LD25803p
protein.
Length = 221
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 204 WTPAFTLTEANTSVLSE--KMGHLWCIIYRLVHTSSKSYTQTTCTNPCVSKSILKANTEL 377
+T ++ + T VL E K HL C+ L H +++ + T+P V IL +N
Sbjct: 14 FTKGLSIQDQYTEVLQEYLKDSHLLCVFVLLSHPAARGELRLKSTDPKV-PPILTSNYLT 72
Query: 378 EKSITFKLHKSFKYL 422
E L + +Y+
Sbjct: 73 ESEDVATLMRGIRYI 87
>AE014298-2075|AAF48402.1| 646|Drosophila melanogaster CG9509-PA
protein.
Length = 646
Score = 29.5 bits (63), Expect = 5.4
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 204 WTPAFTLTEANTSVLSE--KMGHLWCIIYRLVHTSSKSYTQTTCTNPCVSKSILKANTEL 377
+T ++ + T VL E K HL C+ L H +++ + T+P V IL +N
Sbjct: 439 FTKGLSIQDQYTEVLQEYLKDSHLLCVFVLLSHPAARGELRLKSTDPKV-PPILTSNYLT 497
Query: 378 EKSITFKLHKSFKYL 422
E L + +Y+
Sbjct: 498 ESEDVATLMRGIRYI 512
>BT024435-1|ABC86497.1| 93|Drosophila melanogaster IP02132p
protein.
Length = 93
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 248 VREDGTFVVHNLPSGSYVVEIVHPDYMYEPVRVEINSKGKYRAR 379
+++DG V SG + E H D+ Y R + GKYRAR
Sbjct: 25 LQKDGHNVDDYAESGRLISEQYHVDHNYAQDRSAYDELGKYRAR 68
>AY094822-1|AAM11175.1| 801|Drosophila melanogaster LD35927p
protein.
Length = 801
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = +2
Query: 455 RYFQVREQWRLTDFLFNPMVVMMVLPLFLIMILPKMMNDPETKEDLKQISNLAKISDVPE 634
+Y+Q+ +W + L L ++ IL + E ED+K ++ + + +
Sbjct: 533 QYYQMETRWSIKRLLLKTFTAACHLDYIIVDILLTSVLPLEIVEDMK--THFSNLDRFKQ 590
Query: 635 MSEMFTKIFNRGSVPKPTS 691
+ +M T IF+ G P P +
Sbjct: 591 LVKMLTIIFSLGQ-PMPVN 608
>AE014298-1122|AAS65281.1| 801|Drosophila melanogaster CG2258-PC,
isoform C protein.
Length = 801
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = +2
Query: 455 RYFQVREQWRLTDFLFNPMVVMMVLPLFLIMILPKMMNDPETKEDLKQISNLAKISDVPE 634
+Y+Q+ +W + L L ++ IL + E ED+K ++ + + +
Sbjct: 533 QYYQMETRWSIKRLLLKTFTAACHLDYIIVDILLTSVLPLEIVEDMK--THFSNLDRFKQ 590
Query: 635 MSEMFTKIFNRGSVPKPTS 691
+ +M T IF+ G P P +
Sbjct: 591 LVKMLTIIFSLGQ-PMPVN 608
>AE014298-1121|AAS65280.1| 801|Drosophila melanogaster CG2258-PB,
isoform B protein.
Length = 801
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = +2
Query: 455 RYFQVREQWRLTDFLFNPMVVMMVLPLFLIMILPKMMNDPETKEDLKQISNLAKISDVPE 634
+Y+Q+ +W + L L ++ IL + E ED+K ++ + + +
Sbjct: 533 QYYQMETRWSIKRLLLKTFTAACHLDYIIVDILLTSVLPLEIVEDMK--THFSNLDRFKQ 590
Query: 635 MSEMFTKIFNRGSVPKPTS 691
+ +M T IF+ G P P +
Sbjct: 591 LVKMLTIIFSLGQ-PMPVN 608
>AE014298-1120|AAF46320.1| 801|Drosophila melanogaster CG2258-PA,
isoform A protein.
Length = 801
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = +2
Query: 455 RYFQVREQWRLTDFLFNPMVVMMVLPLFLIMILPKMMNDPETKEDLKQISNLAKISDVPE 634
+Y+Q+ +W + L L ++ IL + E ED+K ++ + + +
Sbjct: 533 QYYQMETRWSIKRLLLKTFTAACHLDYIIVDILLTSVLPLEIVEDMK--THFSNLDRFKQ 590
Query: 635 MSEMFTKIFNRGSVPKPTS 691
+ +M T IF+ G P P +
Sbjct: 591 LVKMLTIIFSLGQ-PMPVN 608
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,018,360
Number of Sequences: 53049
Number of extensions: 723067
Number of successful extensions: 2222
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2222
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -