Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H10
         (784 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21324-17|AAK93840.2|  222|Caenorhabditis elegans Hypothetical p...   179   2e-45
AC024788-2|AAF60613.1|  163|Caenorhabditis elegans Hypothetical ...    31   0.70 
AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical ...    30   1.6  
AC006605-3|AAK85442.1|  933|Caenorhabditis elegans Hypothetical ...    30   1.6  
U58748-10|AAB52970.2|  701|Caenorhabditis elegans Hypothetical p...    30   2.1  

>U21324-17|AAK93840.2|  222|Caenorhabditis elegans Hypothetical
           protein C35D10.1 protein.
          Length = 222

 Score =  179 bits (436), Expect = 2e-45
 Identities = 89/207 (42%), Positives = 136/207 (65%), Gaps = 2/207 (0%)
 Frame = +2

Query: 65  KIIXISISXFVLGNVXCASXLTE-AAIGHVIEGRVFPPEDPNNSNWQLDTRVHVNGGEYI 241
           K I +  S  VLG+       TE  +    +EG +  P   N + W    R+H+N G+Y+
Sbjct: 2   KSILLLFSLIVLGSATEEVSRTEQTSTLFSVEGEIALPSTRNCAKWSAGARIHLNHGQYM 61

Query: 242 GFVREDGTFVVHNLPSGSYVVEIVHPDYMYEPVRVEINSKGKYRARKVNYVQTSQVIQVP 421
           GFVR+D TF V  +P+G+Y+V+I + D+++EP+RV+I SKGK RARK+  +Q + V  +P
Sbjct: 62  GFVRQDCTFRVDFVPTGTYIVQIENTDFVFEPIRVDITSKGKMRARKLTILQPNNVNTLP 121

Query: 422 YPLRMKPVTKFRYFQVREQWRLTDFLFNPMVVMMVLPLFLIMILPKM-MNDPETKEDLKQ 598
           YPLR+      RYF+ RE+WR+TD LF+PMV+M+V+PL +++ILPKM  NDPE K++++ 
Sbjct: 122 YPLRLSARGPARYFRKREEWRITDMLFSPMVLMLVVPLVVMLILPKMTANDPELKKEMEN 181

Query: 599 ISNLAKISDVPEMSEMFTKIFNRGSVP 679
           +  + K+ D+P++ EM    F  GS P
Sbjct: 182 M-QMPKV-DMPDVGEMMANFFG-GSAP 205


>AC024788-2|AAF60613.1|  163|Caenorhabditis elegans Hypothetical
           protein Y46E12A.2 protein.
          Length = 163

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 147 MLSKAVCFLLKIPTTAIGNWT 209
           + S+ VCF +KIP  A+G WT
Sbjct: 9   LFSRHVCFEMKIPVRAVGRWT 29


>AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical
           protein T21D12.11 protein.
          Length = 709

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/73 (26%), Positives = 32/73 (43%)
 Frame = -2

Query: 309 ISTTYEPDGKLCTTNVPSSRTKPMYSPPLT*TRVSNCQLLLLGSSGGNTRPSITCPIAAS 130
           ISTT EP+ +  T  + SS     Y P  T    S+ ++    ++G     ++     +S
Sbjct: 477 ISTTIEPNAQSTTYEMESSTVSVTYEPETTSLETSSTKVSSTTATGEPASTTMEANEHSS 536

Query: 129 VRXLAQXTLPSTN 91
                  T+P+TN
Sbjct: 537 TFETESSTVPATN 549


>AC006605-3|AAK85442.1|  933|Caenorhabditis elegans Hypothetical
           protein C07H6.4 protein.
          Length = 933

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +2

Query: 557 KMMNDPETKEDLKQISNLAKISDVPEMSEMFTKIFNRGSVPKPTSSKAKQ 706
           K +   + +  L+ ++   K+++VP++    T+ F R   PKP SSKAKQ
Sbjct: 87  KKLAAAKARRMLEDVARSKKMTEVPKVVVPTTRPFQRP--PKPGSSKAKQ 134


>U58748-10|AAB52970.2|  701|Caenorhabditis elegans Hypothetical
           protein ZK180.6 protein.
          Length = 701

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +1

Query: 364 QIQS*KSQLRSNFTSHSSTLPAEDETSHQIQIFSSSGTMEAH*LLVQP 507
           Q+Q  +    S+ +S SS+  AE   +HQ+++ S+S ++E++   V P
Sbjct: 217 QVQQHRPAASSSSSSSSSSASAEHHPTHQVRVPSASSSIESNEQRVVP 264


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,290,516
Number of Sequences: 27780
Number of extensions: 368483
Number of successful extensions: 1089
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)