Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H06
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   7.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   7.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   9.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 1   TACNSGWANLHRI 39
           T CN GW N  RI
Sbjct: 149 TNCNCGWKNPSRI 161


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 341 SRSISNRNRHSYFSSLR 291
           S   SN+ R  YFSSL+
Sbjct: 112 SEHASNQERFGYFSSLK 128


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/40 (27%), Positives = 15/40 (37%)
 Frame = +1

Query: 82  QKSRQSQVKILRVTMVGQSATWVPRHLXNXFSTEHMXLVF 201
           Q S    V +L    V     W PRH  +  +  H+   F
Sbjct: 152 QSSALDGVTLLADNSVSIKDPWFPRHASDLDNCNHLMTKF 191


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 266 LPYRSPVPSAES*SNYVDFCY 328
           L YR P   +ES S+YV+  Y
Sbjct: 364 LHYRQPPTLSESYSSYVNSMY 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,710
Number of Sequences: 438
Number of extensions: 3725
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)