Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H05
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.3  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.3  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -3

Query: 702 LLTNKLCNSVSFFHTKVCVRVIKKNNSNITSIVLINNTGTNIN 574
           L TNK CN +  F+  V V ++   + + T   + N    N N
Sbjct: 316 LKTNKYCNFIILFYLSVFVILVYYASLDETPNPVTNGKLYNFN 358


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 654 VCVRVIKKNNSNITSIVLINNTGTN 580
           V VR     N + T  + +NN+G N
Sbjct: 470 VFVRFTHLQNQDFTYKITVNNSGNN 494


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 273 SNFIFDIKRILALEINSILL 332
           S F+FDI  I+ L   SILL
Sbjct: 74  SVFLFDIITIVTLTSTSILL 93


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -3

Query: 717 HRIVDLLTNKLCNSVSFFHTKVCVRVIKKNNSNI 616
           +R  D+   ++  + +  ++K  V ++KK  SNI
Sbjct: 69  YRQQDVTLLQITKAKNLLYSKQIVTILKKTKSNI 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,848
Number of Sequences: 336
Number of extensions: 2802
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)