Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H05
         (776 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160916-1|AAD46856.1|  188|Drosophila melanogaster BcDNA.LD0853...   216   2e-56
AE014134-2015|AAN10772.1|  174|Drosophila melanogaster CG4584-PB...   216   2e-56
AE014134-2014|AAF53053.1|  188|Drosophila melanogaster CG4584-PA...   216   2e-56
AF541949-1|AAN34653.1|  406|Drosophila melanogaster unknown prot...    29   9.4  

>AF160916-1|AAD46856.1|  188|Drosophila melanogaster BcDNA.LD08534
           protein.
          Length = 188

 Score =  216 bits (528), Expect = 2e-56
 Identities = 98/136 (72%), Positives = 115/136 (84%)
 Frame = +1

Query: 367 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAP 546
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRVAP
Sbjct: 21  VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 80

Query: 547 RSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQE 726
           RSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHSD DF VK GDRIAQ ICE+I+YP L  
Sbjct: 81  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYPQLVM 140

Query: 727 VANLSVTQRGDGGFGS 774
           V  L  T+RG+ GFGS
Sbjct: 141 VDKLEDTERGEAGFGS 156


>AE014134-2015|AAN10772.1|  174|Drosophila melanogaster CG4584-PB,
           isoform B protein.
          Length = 174

 Score =  216 bits (528), Expect = 2e-56
 Identities = 98/136 (72%), Positives = 115/136 (84%)
 Frame = +1

Query: 367 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAP 546
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRVAP
Sbjct: 7   VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 66

Query: 547 RSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQE 726
           RSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHSD DF VK GDRIAQ ICE+I+YP L  
Sbjct: 67  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYPQLVM 126

Query: 727 VANLSVTQRGDGGFGS 774
           V  L  T+RG+ GFGS
Sbjct: 127 VDKLEDTERGEAGFGS 142


>AE014134-2014|AAF53053.1|  188|Drosophila melanogaster CG4584-PA,
           isoform A protein.
          Length = 188

 Score =  216 bits (528), Expect = 2e-56
 Identities = 98/136 (72%), Positives = 115/136 (84%)
 Frame = +1

Query: 367 ILKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAP 546
           +L+F +L+ENA +PVRGS KAAG+DL SAYD  VPARGK +VKTDLQ+++P G YGRVAP
Sbjct: 21  VLRFAKLTENALEPVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAP 80

Query: 547 RSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQE 726
           RSGLA+KNFIDVGAGV+DEDYRGN+GVVLFNHSD DF VK GDRIAQ ICE+I+YP L  
Sbjct: 81  RSGLAVKNFIDVGAGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYPQLVM 140

Query: 727 VANLSVTQRGDGGFGS 774
           V  L  T+RG+ GFGS
Sbjct: 141 VDKLEDTERGEAGFGS 156


>AF541949-1|AAN34653.1|  406|Drosophila melanogaster unknown
           protein.
          Length = 406

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 699 LTNKLCNSVSFFHTKVCVRVIKKNNSNITSI 607
           L NK  N ++  H   C+RVIK  N+ + +I
Sbjct: 52  LVNKYANRLTSEHNNKCLRVIKSLNTRLNNI 82


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,843,045
Number of Sequences: 53049
Number of extensions: 495734
Number of successful extensions: 999
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)