Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_H03
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.94 
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   8.8  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   8.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 684 LACCTSGVSTTYWPS 640
           L C TS  STT WP+
Sbjct: 769 LQCATSNYSTTRWPA 783


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 122 FFRDLKRTSWALLDSQYSP 66
           F  D K   W LL+++Y P
Sbjct: 92  FLIDNKPEIWVLLEAKYDP 110


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 122 FFRDLKRTSWALLDSQYSP 66
           F  D K   W LL+++Y P
Sbjct: 92  FLIDNKPEIWVLLEAKYDP 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,305
Number of Sequences: 438
Number of extensions: 2604
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)