Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G24
         (767 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    24   5.9  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    23   7.9  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    23   7.9  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    23   7.9  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   7.9  

>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 267 YPSWVRSGQCSCPNEGTVPKGEPLCP 190
           YP+  +      PN   VPK  P CP
Sbjct: 71  YPAQAQCAPGVTPNTEPVPKPSPNCP 96


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -3

Query: 267 YPSWVRSGQCSCPNEGTVPKGEPLCP 190
           YPS  +      PN    PK  P CP
Sbjct: 71  YPSQAQCAPGVTPNTEPAPKPSPNCP 96


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -3

Query: 267 YPSWVRSGQCSCPNEGTVPKGEPLCP 190
           YPS  +      PN    PK  P CP
Sbjct: 71  YPSQAQCAPGVTPNTEPAPKPSPNCP 96


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -3

Query: 267 YPSWVRSGQCSCPNEGTVPKGEPLCP 190
           YPS  +      PN    PK  P CP
Sbjct: 71  YPSQAQCAPGVTPNTEPAPKPSPNCP 96


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 316 VPATCYSSDIARVPGCQP*NYCTNIRSS-FRCSKSIKVQFASCSAARTSCVR 468
           V A   +SD A +P  +P N  T+ R   +  + SIK+Q A C AAR    R
Sbjct: 250 VIALTKASDGA-MPRRKPPNGATSRRQPVYWWNASIKIQRAECVAARRKMQR 300


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,144
Number of Sequences: 2352
Number of extensions: 15108
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)