Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G22
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    26   0.29 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   6.2  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = -3

Query: 761 ANHFTWIGXTIAISESIFARYIFVSIFEH*Y*CFEYLNGKVPSVF*G-SVIHVSFFACRY 585
           AN++  +G T+ I  S+F   I + IF+        LNG       G    ++  F C  
Sbjct: 224 ANYYRILGDTVEIFNSLFGYQIILVIFDCCLETVSALNGAFLYTINGQGQFNIEMFLCNM 283

Query: 584 ATINFI 567
           + +  I
Sbjct: 284 SLLTVI 289


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 489 DRATAEQVMDPRTKMILFKLLNRGIINEINGCISTG 596
           D ATA+++ + R     F+L   G   ++  C  +G
Sbjct: 26  DEATADELCENRPADEYFRLTTEGDCRDVVRCTKSG 61


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 623 GSVIHVSFFACRYA 582
           GS+ H+SF AC  A
Sbjct: 340 GSLYHISFMACSSA 353


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 262 LTRMTLHKVQRKKITSTAKLQQQN 333
           LTR  +H+  R+ +   A L+Q+N
Sbjct: 369 LTREEIHEKARENLKHHANLRQKN 392


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,362
Number of Sequences: 336
Number of extensions: 3087
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)