Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G21
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    60   9e-11
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    51   3e-08
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   1.4  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    24   5.8  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   7.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.6  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    23   7.6  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 59.7 bits (138), Expect = 9e-11
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = +2

Query: 560  DSKLQFSTHIQNITRKSFKTLGFIFRNCKDFKKPHTKITIYNALVRSTLEYCCIVWNP 733
            DS L F  HI ++  +  + LG + R   +F+ P     +YN +VRS LEY C+VW+P
Sbjct: 852  DSSLNFKQHIDDVVARGNQLLGVVIRTTNEFRNPMCIKAVYNCIVRSVLEYSCVVWSP 909


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 24/58 (41%), Positives = 32/58 (55%)
 Frame = +2

Query: 560 DSKLQFSTHIQNITRKSFKTLGFIFRNCKDFKKPHTKITIYNALVRSTLEYCCIVWNP 733
           DS+L F   +  +  K+ +TLGFI R    F+       +Y ALVR  LEY  I+WNP
Sbjct: 781 DSRLNFKLQLDEVLLKANRTLGFILRFTSIFRDQSFLRNLYYALVRPLLEYASIIWNP 838


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/45 (22%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 557 YNKYETENYIFIEEQIYLETSEALKLLLWV-PTKQNSPRRSSRHW 426
           Y   + ++  F ++ +Y    E  ++++ + PTK N P+   +H+
Sbjct: 469 YIVLDRQSSAFEQDHVYSLVKENQRIIMMLQPTKDNGPKSEEKHF 513


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +3

Query: 171 HELHKGHESMHTTMVLILIG-ALVISQVVIVQW--KKRHYRS 287
           + L++  +  +   V++++  +LVISQ+V ++W   KR  R+
Sbjct: 99  YALYERQKFAYFAAVIVIVSFSLVISQIVSIRWYLNKRKIRN 140



 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 539 LFHICYNDSKLQFSTHIQNITRKSFKTLGFIFR 637
           LF +C+  +    +  +QN+ R     LG IF+
Sbjct: 322 LFSVCWALASFSKNVRLQNVHRLVLTWLGVIFQ 354


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 694 YESIINCDLSVWFFEIFAIAKY 629
           + S + C LSVWF   F + ++
Sbjct: 197 FSSSLCCFLSVWFVVAFTVERF 218


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 371 N*NKSPPTVFKAYHDWDGPHGDHC 300
           N N++     K  H+  GPH D C
Sbjct: 843 NCNRTTGECLKCIHNTAGPHCDQC 866


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +2

Query: 545 HICYNDSKLQFSTHIQNITRKSFKTLGFIFRNCKDFKKPHTKITIY 682
           H  Y+ ++  +  +  N ++ +F+T G I     +   PH  I  Y
Sbjct: 133 HSHYSHNQYYYMQNYSNYSQHNFQTAGPISSGLYNGHHPHQTIATY 178


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,441
Number of Sequences: 2352
Number of extensions: 15124
Number of successful extensions: 40
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)