Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G21
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457298-1|CAG33579.1|  327|Homo sapiens RNF121 protein.              124   3e-28
BC117273-1|AAI17274.1|  317|Homo sapiens RNF121 protein protein.      124   3e-28
BC009672-1|AAH09672.2|  329|Homo sapiens RNF121 protein protein.      124   3e-28
AK023139-1|BAB14423.1|  327|Homo sapiens 1,4-N-acetylglucosaminy...   124   3e-28
BC034385-1|AAH34385.1|  328|Homo sapiens ring finger protein 175...   120   6e-27

>CR457298-1|CAG33579.1|  327|Homo sapiens RNF121 protein.
          Length = 327

 Score =  124 bits (300), Expect = 3e-28
 Identities = 51/108 (47%), Positives = 77/108 (71%)
 Frame = +3

Query: 126 ELTSEERLRYDHQKLHELHKGHESMHTTMVLILIGALVISQVVIVQWKKRHYRSYAFFTM 305
           +L+ EE+ R +H ++H  H+GHE+MH  MVLILI  LV++Q+++VQWK+RH RSY   T+
Sbjct: 26  DLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTL 85

Query: 306 IAMWSIPVMISFKNGWWRFVSIWSVFTLLTALVIRKSSIKPMSATTPR 449
             MW +P+  + K  WWRF+ IW +F+ +TA V  +++ KP+  TTPR
Sbjct: 86  FQMWVVPLYFTVKLHWWRFLVIWILFSAVTAFVTFRATRKPLVQTTPR 133


>BC117273-1|AAI17274.1|  317|Homo sapiens RNF121 protein protein.
          Length = 317

 Score =  124 bits (300), Expect = 3e-28
 Identities = 51/108 (47%), Positives = 77/108 (71%)
 Frame = +3

Query: 126 ELTSEERLRYDHQKLHELHKGHESMHTTMVLILIGALVISQVVIVQWKKRHYRSYAFFTM 305
           +L+ EE+ R +H ++H  H+GHE+MH  MVLILI  LV++Q+++VQWK+RH RSY   T+
Sbjct: 16  DLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTL 75

Query: 306 IAMWSIPVMISFKNGWWRFVSIWSVFTLLTALVIRKSSIKPMSATTPR 449
             MW +P+  + K  WWRF+ IW +F+ +TA V  +++ KP+  TTPR
Sbjct: 76  FQMWVVPLYFTVKLHWWRFLVIWILFSAVTAFVTFRATRKPLVQTTPR 123


>BC009672-1|AAH09672.2|  329|Homo sapiens RNF121 protein protein.
          Length = 329

 Score =  124 bits (300), Expect = 3e-28
 Identities = 51/108 (47%), Positives = 77/108 (71%)
 Frame = +3

Query: 126 ELTSEERLRYDHQKLHELHKGHESMHTTMVLILIGALVISQVVIVQWKKRHYRSYAFFTM 305
           +L+ EE+ R +H ++H  H+GHE+MH  MVLILI  LV++Q+++VQWK+RH RSY   T+
Sbjct: 28  DLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTL 87

Query: 306 IAMWSIPVMISFKNGWWRFVSIWSVFTLLTALVIRKSSIKPMSATTPR 449
             MW +P+  + K  WWRF+ IW +F+ +TA V  +++ KP+  TTPR
Sbjct: 88  FQMWVVPLYFTVKLHWWRFLVIWILFSAVTAFVTFRATRKPLVQTTPR 135


>AK023139-1|BAB14423.1|  327|Homo sapiens
           1,4-N-acetylglucosaminyltransferase IV.  protein.
          Length = 327

 Score =  124 bits (300), Expect = 3e-28
 Identities = 51/108 (47%), Positives = 77/108 (71%)
 Frame = +3

Query: 126 ELTSEERLRYDHQKLHELHKGHESMHTTMVLILIGALVISQVVIVQWKKRHYRSYAFFTM 305
           +L+ EE+ R +H ++H  H+GHE+MH  MVLILI  LV++Q+++VQWK+RH RSY   T+
Sbjct: 26  DLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTL 85

Query: 306 IAMWSIPVMISFKNGWWRFVSIWSVFTLLTALVIRKSSIKPMSATTPR 449
             MW +P+  + K  WWRF+ IW +F+ +TA V  +++ KP+  TTPR
Sbjct: 86  FQMWVVPLYFTVKLHWWRFLVIWILFSAVTAFVTFRATRKPLVQTTPR 133


>BC034385-1|AAH34385.1|  328|Homo sapiens ring finger protein 175
           protein.
          Length = 328

 Score =  120 bits (289), Expect = 6e-27
 Identities = 44/117 (37%), Positives = 82/117 (70%)
 Frame = +3

Query: 99  PVDPNKXYQELTSEERLRYDHQKLHELHKGHESMHTTMVLILIGALVISQVVIVQWKKRH 278
           P      + +L++E+      ++++++H+GH+SMH  M+LI +  LVI+Q+V+VQW++RH
Sbjct: 18  PQQEQLSHTKLSAEDTWNLQQERMYKMHRGHDSMHVEMILIFLCVLVIAQIVLVQWRQRH 77

Query: 279 YRSYAFFTMIAMWSIPVMISFKNGWWRFVSIWSVFTLLTALVIRKSSIKPMSATTPR 449
            RSY   T++ MW +P+  + K  WWRF+S+W +F+++T+ ++ +++ KP+S  TPR
Sbjct: 78  GRSYNLVTLLQMWVVPLYFTIKLYWWRFLSMWGMFSVITSYILFRATRKPLSGRTPR 134


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,773,986
Number of Sequences: 237096
Number of extensions: 2216933
Number of successful extensions: 7913
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7913
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)