Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G21
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-5|CAA86743.1|  409|Caenorhabditis elegans Hypothetical pr...   114   5e-26
Z83123-6|CAD45601.1|  327|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF016682-3|AAB66186.2|  308|Caenorhabditis elegans Hypothetical ...    29   4.7  
L17337-2|AAP68929.1|  202|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z78416-4|CAB01678.2|  611|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z46787-5|CAA86743.1|  409|Caenorhabditis elegans Hypothetical
           protein C16C10.5 protein.
          Length = 409

 Score =  114 bits (275), Expect = 5e-26
 Identities = 45/108 (41%), Positives = 75/108 (69%)
 Frame = +3

Query: 126 ELTSEERLRYDHQKLHELHKGHESMHTTMVLILIGALVISQVVIVQWKKRHYRSYAFFTM 305
           ELT EE+   +H+K+HE HKGHE+MH  M++I + ++++ Q+ +V WK++H++SY   T+
Sbjct: 96  ELTEEEQWAEEHRKMHEKHKGHEAMHMEMMVIFMISVIVGQIFLVTWKRKHFKSYQMCTL 155

Query: 306 IAMWSIPVMISFKNGWWRFVSIWSVFTLLTALVIRKSSIKPMSATTPR 449
           I M +IPV + F   W+RF++ W VF + +A +  K+S + +S  TPR
Sbjct: 156 IGMLTIPVYVCFNRSWYRFLATWLVFCIFSAFIWLKASAQHISGGTPR 203


>Z83123-6|CAD45601.1|  327|Caenorhabditis elegans Hypothetical
           protein T04A11.12 protein.
          Length = 327

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/74 (21%), Positives = 32/74 (43%)
 Frame = -3

Query: 409 LMTRAVRSVNTLQIETNLHQPFLKLIMTGMDHMAIIVKKAYDL*CRFFHWTMTTCEITSA 230
           L+    RS+++ ++E +L      +I + + +  I++       C FF W  T+  I   
Sbjct: 238 LLNAQTRSMHSYKVEVSLSLTTFSMIFSYLSNAMIVI-------CSFFFWNYTSLAIMLR 290

Query: 229 PINIKTIVVCIDSW 188
           P     +  C+  W
Sbjct: 291 PFG-NDLDTCVAPW 303


>AF016682-3|AAB66186.2|  308|Caenorhabditis elegans Hypothetical
           protein T07D3.6 protein.
          Length = 308

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 536 FLFHICYNDSKLQFSTHIQNIT 601
           FL HIC+  S+ Q  T+ QN+T
Sbjct: 53  FLLHICFQKSRKQKFTYSQNVT 74


>L17337-2|AAP68929.1|  202|Caenorhabditis elegans Hypothetical
           protein ZK686.5 protein.
          Length = 202

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 554 YNDSKLQFSTHIQNITRKSFKTLGFIFRNC 643
           Y D K + +  I+NI +K F  LG +  NC
Sbjct: 57  YKDRKRKNTEEIRNIKKKLFMDLGIVRTNC 86


>Z78416-4|CAB01678.2|  611|Caenorhabditis elegans Hypothetical
           protein C23H4.4 protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 330 MISFKNGWWRFVSIWSVFTLLTALVI 407
           +IS  N WW +VSI  +F +++ L I
Sbjct: 571 LISVLNQWWFYVSILLLFVIVSVLFI 596


>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
            protein Y47D3B.7 protein.
          Length = 1113

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 697  AYESIINCDLSVWFFEIFAIAKYKSQCFKALS 602
            AYE I+N  L  W   +FA   Y +Q FK  S
Sbjct: 994  AYEWIMNSLLDAWRSNLFASKPYWTQSFKGQS 1025


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,944,863
Number of Sequences: 27780
Number of extensions: 356490
Number of successful extensions: 942
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)