BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G19
(386 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095027-1|AAM11355.1| 1379|Drosophila melanogaster LD11664p pro... 27 8.5
AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-P... 27 8.5
>AY095027-1|AAM11355.1| 1379|Drosophila melanogaster LD11664p protein.
Length = 1379
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 177 IVPAGHSAGDGSPFSTPAGCXSELGFGHYEASQNKE 70
++ GH +GDG+P P+G + ++A + E
Sbjct: 1287 VIDYGHKSGDGNPIDGPSGSNPDDRIPEFKAMKTFE 1322
>AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-PC
protein.
Length = 1884
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 177 IVPAGHSAGDGSPFSTPAGCXSELGFGHYEASQNKE 70
++ GH +GDG+P P+G + ++A + E
Sbjct: 1287 VIDYGHKSGDGNPIDGPSGSNPDDRIPEFKAMKTFE 1322
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,231,438
Number of Sequences: 53049
Number of extensions: 356872
Number of successful extensions: 715
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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