Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G18
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   6.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 215  PTPLRDLTKIVNTWIDKFVSLFEYLYPDFGGD*TCW 322
            P P+      V T +D   S  E+++PD+    + W
Sbjct: 1007 PEPVTPAPPQVTTGVDTGASSTEHMHPDWTTKPSTW 1042


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 521 TFISLRYFIISSVTILEQSPFFN 453
           +F++  + ++S+VTI+  S  FN
Sbjct: 20  SFVNSIFLVMSAVTIILSSLIFN 42


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 66  YTAHDIITTKITFFHSKVIGRP 1
           YT+  ++  +  F H K + RP
Sbjct: 95  YTSAQLVELEREFHHGKYLSRP 116


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -3

Query: 66  YTAHDIITTKITFFHSKVIGRP 1
           YT+  ++  +  F H K + RP
Sbjct: 86  YTSAQLVELEREFHHGKYLSRP 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,793
Number of Sequences: 336
Number of extensions: 3521
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)