Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G18
(644 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical ... 29 2.1
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 29 2.1
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 29 2.1
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 29 3.7
U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily as... 29 3.7
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 29 3.7
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 29 3.7
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 28 6.5
U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical pr... 27 8.6
U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical pr... 27 8.6
>U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical
protein F54D8.6 protein.
Length = 783
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +1
Query: 379 KTVQDVVDNMLTRLEELTSVLQMVKLK-NGDCSNIVTEDIIKYRREINVLGKRI-STLSN 552
K + DV+D M+T ++ + + M K+ + N+VT DIIK +R I + K + + +SN
Sbjct: 672 KNLGDVIDMMIT-IDRIKEQVDMDKIMIHKHMENVVTMDIIKDKRIIMEVKKDMENIISN 730
Query: 553 VLMFLSNNVDTVEKQVXRAE 612
+ DT+ K + + E
Sbjct: 731 TTV-----KDTINKDMGKME 745
>AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical
protein H06I04.3b protein.
Length = 716
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 484 TEDIIKYRREINVLGKRISTLSNVLMFLSNNVDTVEKQVXRAEG 615
TE++I+Y ++ VLG R L +L + + ++T+E+Q EG
Sbjct: 292 TEEVIEYMNDVKVLGPR--ELRVLLRWRKSMLETLEEQRKAVEG 333
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 484 TEDIIKYRREINVLGKRISTLSNVLMFLSNNVDTVEKQVXRAEG 615
TE++I+Y ++ VLG R L +L + + ++T+E+Q EG
Sbjct: 292 TEEVIEYMNDVKVLGPR--ELRVLLRWRKSMLETLEEQRKAVEG 333
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 484 TEDIIKYRREINVLGKRISTLSNVLMFLSNNVDTVEKQVXRAEG 615
TE++I+Y ++ VLG R L +L + + ++T+E+Q EG
Sbjct: 292 TEEVIEYMNDVKVLGPR--ELRVLLRWRKSMLETLEEQRKAVEG 333
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 555 YIGQGRNPFP*HIYLSTIFYYIFSHN-IGAIAVL*FNHLKNTRQ 427
Y+ NPF +YLS +FY+I +N + + F H + +Q
Sbjct: 1128 YLVMQDNPFLPRLYLSGVFYFILMYNGSNVLPIARFLHYTHMKQ 1171
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 555 YIGQGRNPFP*HIYLSTIFYYIFSHN-IGAIAVL*FNHLKNTRQ 427
Y+ NPF +YLS +FY+I +N + + F H + +Q
Sbjct: 1128 YLVMQDNPFLPRLYLSGVFYFILMYNGSNVLPIARFLHYTHMKQ 1171
>U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily
assigned gene nameprotein 151 protein.
Length = 785
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 358 VDVLEGFKTVQDVVDNMLTRLEELTSVLQMVKLKNGDCSNIVTED 492
V VLE +K +++V L E SVL MV K+ C+ +T D
Sbjct: 540 VAVLEAYKDAKNLVLFQLLPHEHKMSVLNMVLKKHPSCTIPITSD 584
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 555 YIGQGRNPFP*HIYLSTIFYYIFSHN-IGAIAVL*FNHLKNTRQ 427
Y+ NPF +YLS +FY+I +N + + F H + +Q
Sbjct: 1128 YLVMQDNPFLPRLYLSGVFYFILMYNGSNVLPIARFLHYTHMKQ 1171
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/85 (23%), Positives = 39/85 (45%)
Frame = +1
Query: 361 DVLEGFKTVQDVVDNMLTRLEELTSVLQMVKLKNGDCSNIVTEDIIKYRREINVLGKRIS 540
DV + KT Q+ + M ++ EL L + ++N + +D+ + E+N+L
Sbjct: 449 DVKKELKTSQNKENKMRKKVSELEKKLDVENVQNEQEVKEMEDDLRGKQEELNILRNDSL 508
Query: 541 TLSNVLMFLSNNVDTVEKQVXRAEG 615
+ +VLM +++ K EG
Sbjct: 509 KVHDVLMEIADLKQKHSKLEKHVEG 533
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 415 RLEELTSVLQ-MVKLKNGDCSNIVTEDIIKYRREINVLGKRISTLSNVLMFLSNN 576
RL E SV + +NGDCS V E K R+E+++ K L + L NN
Sbjct: 99 RLAEAESVPNSLATSRNGDCSFHVAELEQKLRKEMSLTRKYEQRLQQLESQLKNN 153
>U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical
protein T10E10.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 378 KSFQHVHFEIC*IINCYILQHV*SPPKSGYKYSNKLTNL 262
K+ +HV + + I+ CYI+ H+ P Y Y N N+
Sbjct: 261 KAERHVTYTVIAIVTCYIVSHI--PSACLYVYINLFHNV 297
>Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical
protein C25F9.1 protein.
Length = 431
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Frame = +2
Query: 224 LRDLTKIVNTWIDKFVSLFEYLYPDFG-------GD*TCWRI*QLIIQHISKWTCWKDLK 382
+RD+ + V+ ++ F++L YL +G CW++ L+I S TC+ +LK
Sbjct: 104 IRDIFQRVSAYLGMFLALLRYLVMTYGTIRKTFLSPKDCWKLFILLILISSLITCFFNLK 163
>U28971-4|AAK68668.1| 628|Caenorhabditis elegans Hypothetical
protein B0244.10 protein.
Length = 628
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 584 VSTLFDKNINTLDRVEILFPSTFISLRYFIISSVTILE 471
++ FDKNI+ + ++++ FI+L F+ I E
Sbjct: 247 INIFFDKNISKMVKLQLTLGKWFIALYRFLFQMTNIFE 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,575,057
Number of Sequences: 27780
Number of extensions: 310669
Number of successful extensions: 719
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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