Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G17
(338 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86407-2|BAA21825.1| 793|Homo sapiens ApoER2delta4-7 protein. 31 0.91
D86407-1|BAA21824.1| 963|Homo sapiens ApoER2 protein. 31 0.91
D50678-1|BAA09328.1| 963|Homo sapiens apolipoprotein E receptor... 31 0.91
BC051836-1|AAH51836.2| 904|Homo sapiens low density lipoprotein... 31 0.91
BC006443-1|AAH06443.1| 244|Homo sapiens Similar to low density ... 31 0.91
AL606760-4|CAI18908.1| 963|Homo sapiens low density lipoprotein... 31 0.91
AL606760-2|CAI18910.1| 904|Homo sapiens low density lipoprotein... 31 0.91
AL355483-3|CAI22781.1| 963|Homo sapiens low density lipoprotein... 31 0.91
AL355483-1|CAI22780.1| 904|Homo sapiens low density lipoprotein... 31 0.91
U80918-1|AAD00451.1| 930|Homo sapiens transcription factor prot... 30 1.6
BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein. 30 1.6
BC036764-1|AAH36764.1| 344|Homo sapiens TTBK1 protein protein. 30 2.1
AL133375-3|CAI20206.2| 1321|Homo sapiens tau tubulin kinase 1 pr... 30 2.1
AB218664-1|BAE78660.1| 1321|Homo sapiens brain-derived tau kinas... 30 2.1
AB058758-1|BAB47484.1| 1270|Homo sapiens KIAA1855 protein protein. 30 2.1
M63618-1|AAA35606.1| 2095|Homo sapiens bullous pemphigoid antige... 28 6.4
L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antige... 28 6.4
CR457305-1|CAG33586.1| 394|Homo sapiens PHAX protein. 28 6.4
BC021161-1|AAH21161.1| 394|Homo sapiens RNA U, small nuclear RN... 28 6.4
AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein. 28 6.4
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 28 6.4
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 28 6.4
AK024065-1|BAB14809.1| 394|Homo sapiens protein ( Homo sapiens ... 28 6.4
AK023255-1|BAB14489.1| 394|Homo sapiens protein ( Homo sapiens ... 28 6.4
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 28 6.4
AB209135-1|BAD92372.1| 761|Homo sapiens mastermind-like 1 varia... 28 6.4
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 28 6.4
BC040043-1|AAH40043.2| 215|Homo sapiens SRA1 protein protein. 28 8.5
AF293026-1|AAG02116.1| 237|Homo sapiens steroid receptor RNA ac... 28 8.5
AF293024-1|AAG02114.1| 236|Homo sapiens steroid receptor RNA ac... 28 8.5
>D86407-2|BAA21825.1| 793|Homo sapiens ApoER2delta4-7 protein.
Length = 793
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 5 PAAXRRPGSP-RSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQPTCLT 148
PA R PG+ ST+Q PS VP + PRAP + P+ L+
Sbjct: 585 PATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAP-SISPSTLS 632
>D86407-1|BAA21824.1| 963|Homo sapiens ApoER2 protein.
Length = 963
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 5 PAAXRRPGSP-RSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQPTCLT 148
PA R PG+ ST+Q PS VP + PRAP + P+ L+
Sbjct: 755 PATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAP-SISPSTLS 802
>D50678-1|BAA09328.1| 963|Homo sapiens apolipoprotein E receptor 2
precursor protein.
Length = 963
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 5 PAAXRRPGSP-RSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQPTCLT 148
PA R PG+ ST+Q PS VP + PRAP + P+ L+
Sbjct: 755 PATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAP-SISPSTLS 802
>BC051836-1|AAH51836.2| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 5 PAAXRRPGSP-RSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQPTCLT 148
PA R PG+ ST+Q PS VP + PRAP + P+ L+
Sbjct: 755 PATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAP-SISPSTLS 802
>BC006443-1|AAH06443.1| 244|Homo sapiens Similar to low density
lipoprotein receptor-related protein 8, apolipoprotein e
protein.
Length = 244
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 5 PAAXRRPGSP-RSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQPTCLT 148
PA R PG+ ST+Q PS VP + PRAP + P+ L+
Sbjct: 36 PATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAP-SISPSTLS 83
>AL606760-4|CAI18908.1| 963|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 963
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 5 PAAXRRPGSP-RSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQPTCLT 148
PA R PG+ ST+Q PS VP + PRAP + P+ L+
Sbjct: 755 PATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAP-SISPSTLS 802
>AL606760-2|CAI18910.1| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 5 PAAXRRPGSP-RSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQPTCLT 148
PA R PG+ ST+Q PS VP + PRAP + P+ L+
Sbjct: 755 PATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAP-SISPSTLS 802
>AL355483-3|CAI22781.1| 963|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 963
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 5 PAAXRRPGSP-RSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQPTCLT 148
PA R PG+ ST+Q PS VP + PRAP + P+ L+
Sbjct: 755 PATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAP-SISPSTLS 802
>AL355483-1|CAI22780.1| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 5 PAAXRRPGSP-RSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQPTCLT 148
PA R PG+ ST+Q PS VP + PRAP + P+ L+
Sbjct: 755 PATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAP-SISPSTLS 802
>U80918-1|AAD00451.1| 930|Homo sapiens transcription factor
protein.
Length = 930
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Frame = +2
Query: 23 PGSPRSSTFQRRCAAGPSHXC----RVPXCPTSPRAPL---NXQPTCL 145
PG P + ++ +A PS C CP+SP PL +PTCL
Sbjct: 801 PGQPPPALLPQQVSAPPSSSCPPGLEHSLCPSSPSPPLPPATQEPTCL 848
>BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein.
Length = 440
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/32 (31%), Positives = 24/32 (75%)
Frame = +1
Query: 241 FIKRQDQNRSDLDEQLKEYIXEWRKQRAKEED 336
++K+QDQ + ++ E+LK+ + E +++ +E+D
Sbjct: 84 YLKKQDQEKDNMIEKLKQQLNETKEKAQEEKD 115
>BC036764-1|AAH36764.1| 344|Homo sapiens TTBK1 protein protein.
Length = 344
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 8 AAXRRPGSPRSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQP 136
AA SPRS + RR + PSH R P P QP
Sbjct: 264 AARNASASPRSQSLSRRESPSPSHQARPGVPPPRGVPPARAQP 306
>AL133375-3|CAI20206.2| 1321|Homo sapiens tau tubulin kinase 1
protein.
Length = 1321
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 8 AAXRRPGSPRSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQP 136
AA SPRS + RR + PSH R P P QP
Sbjct: 1241 AARNASASPRSQSLSRRESPSPSHQARPGVPPPRGVPPARAQP 1283
>AB218664-1|BAE78660.1| 1321|Homo sapiens brain-derived tau kinase
protein.
Length = 1321
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 8 AAXRRPGSPRSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQP 136
AA SPRS + RR + PSH R P P QP
Sbjct: 1241 AARNASASPRSQSLSRRESPSPSHQARPGVPPPRGVPPARAQP 1283
>AB058758-1|BAB47484.1| 1270|Homo sapiens KIAA1855 protein protein.
Length = 1270
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 8 AAXRRPGSPRSSTFQRRCAAGPSHXCRVPXCPTSPRAPLNXQP 136
AA SPRS + RR + PSH R P P QP
Sbjct: 1190 AARNASASPRSQSLSRRESPSPSHQARPGVPPPRGVPPARAQP 1232
>M63618-1|AAA35606.1| 2095|Homo sapiens bullous pemphigoid antigen
protein.
Length = 2095
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +1
Query: 244 IKRQDQNRSDLDEQLKEYIXEWRKQRAKEED 336
+KR+D + +DL++Q + + E R++R EE+
Sbjct: 702 LKRKDLSLNDLEQQKNKLMEELRRKRDNEEE 732
>L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antigen
protein.
Length = 2649
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +1
Query: 244 IKRQDQNRSDLDEQLKEYIXEWRKQRAKEED 336
+KR+D + +DL++Q + + E R++R EE+
Sbjct: 1256 LKRKDLSLNDLEQQKNKLMEELRRKRDNEEE 1286
>CR457305-1|CAG33586.1| 394|Homo sapiens PHAX protein.
Length = 394
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 247 KRQDQNRSDLDEQLKEYIXEWRKQRAKEED 336
K ++ DLD++L EY+ +K +KEE+
Sbjct: 162 KESQEHTKDLDKELDEYMHGGKKMGSKEEE 191
>BC021161-1|AAH21161.1| 394|Homo sapiens RNA U, small nuclear RNA
export adaptor (phosphorylation regulated) protein.
Length = 394
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 247 KRQDQNRSDLDEQLKEYIXEWRKQRAKEED 336
K ++ DLD++L EY+ +K +KEE+
Sbjct: 162 KESQEHTKDLDKELDEYMHGGKKMGSKEEE 191
>AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein.
Length = 2649
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +1
Query: 244 IKRQDQNRSDLDEQLKEYIXEWRKQRAKEED 336
+KR+D + +DL++Q + + E R++R EE+
Sbjct: 1256 LKRKDLSLNDLEQQKNKLMEELRRKRDNEEE 1286
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 16 SPPRIAAVLHIPTSLCCRSKSPXPSAXVPDFSPCSTQXTTNMS 144
+P I++ LH+P+SL + SP P +P+ SP ++ ++ +S
Sbjct: 1393 APLTISSPLHVPSSLPGPASSPMP---IPNSSPLASPVSSTVS 1432
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 16 SPPRIAAVLHIPTSLCCRSKSPXPSAXVPDFSPCSTQXTTNMS 144
+P I++ LH+P+SL + SP P +P+ SP ++ ++ +S
Sbjct: 42 APLTISSPLHVPSSLPGPASSPMP---IPNSSPLASPVSSTVS 81
>AK024065-1|BAB14809.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ14003 fis, clone Y79AA1002311, moderately
similar to R.norvegicus mRNA for cytosolic
resiniferatoxin-binding ).
Length = 394
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 247 KRQDQNRSDLDEQLKEYIXEWRKQRAKEED 336
K ++ DLD++L EY+ +K +KEE+
Sbjct: 162 KESQEHTKDLDKELDEYMHGGKKMGSKEEE 191
>AK023255-1|BAB14489.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ13193 fis, clone NT2RP3004348, moderately
similar to R.norvegicus mRNA for cytosolic
resiniferatoxin-binding ).
Length = 394
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 247 KRQDQNRSDLDEQLKEYIXEWRKQRAKEED 336
K ++ DLD++L EY+ +K +KEE+
Sbjct: 162 KESQEHTKDLDKELDEYMHGGKKMGSKEEE 191
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 16 SPPRIAAVLHIPTSLCCRSKSPXPSAXVPDFSPCSTQXTTNMS 144
+P I++ LH+P+SL + SP P +P+ SP ++ ++ +S
Sbjct: 1134 APLTISSPLHVPSSLPGPASSPMP---IPNSSPLASPVSSTVS 1173
>AB209135-1|BAD92372.1| 761|Homo sapiens mastermind-like 1 variant
protein.
Length = 761
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 5 PAAXRRPGSPRSSTFQRRCAAGPSHXCRVPXCPTSPRAP 121
PAA R P S ++ R A S R P C +PR P
Sbjct: 34 PAAAREPAPLPSGAWRGREAERGSRGERSPQCQPAPRGP 72
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 16 SPPRIAAVLHIPTSLCCRSKSPXPSAXVPDFSPCSTQXTTNMS 144
+P I++ LH+P+SL + SP P +P+ SP ++ ++ +S
Sbjct: 1216 APLTISSPLHVPSSLPGPASSPMP---IPNSSPLASPVSSTVS 1255
>BC040043-1|AAH40043.2| 215|Homo sapiens SRA1 protein protein.
Length = 215
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 26 GSPRSSTFQRRCAAGPSHXCRVPXCPTSPRAP 121
G PR S +R AA RVP TSP P
Sbjct: 21 GGPRRSLLTKRVAAPQDGSPRVPASETSPGPP 52
>AF293026-1|AAG02116.1| 237|Homo sapiens steroid receptor RNA
activator isoform 3 protein.
Length = 237
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 26 GSPRSSTFQRRCAAGPSHXCRVPXCPTSPRAP 121
G PR S +R AA RVP TSP P
Sbjct: 42 GGPRRSLLTKRVAAPQDGSPRVPASETSPGPP 73
>AF293024-1|AAG02114.1| 236|Homo sapiens steroid receptor RNA
activator isoform 1 protein.
Length = 236
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 26 GSPRSSTFQRRCAAGPSHXCRVPXCPTSPRAP 121
G PR S +R AA RVP TSP P
Sbjct: 42 GGPRRSLLTKRVAAPQDGSPRVPASETSPGPP 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.311 0.128 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,864,139
Number of Sequences: 237096
Number of extensions: 960827
Number of successful extensions: 2159
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2151
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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