Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_G16
         (831 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024759-4|AAK68434.1|  356|Caenorhabditis elegans Hypothetical ...    31   1.3  
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro...    28   7.1  
AC024759-3|AAK68433.1|  355|Caenorhabditis elegans Hypothetical ...    28   9.4  
AC024759-2|AAM97964.1|  376|Caenorhabditis elegans Hypothetical ...    28   9.4  
AC024759-1|AAK73907.1|  376|Caenorhabditis elegans Hypothetical ...    28   9.4  

>AC024759-4|AAK68434.1|  356|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.4 protein.
          Length = 356

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 546 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 632
           D+ H +SGL  TWLGH   ++   GV+++
Sbjct: 76  DDFHSESGLFATWLGHATVLVDLEGVKFV 104


>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical protein
            F33C8.1b protein.
          Length = 1234

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = +1

Query: 439  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 546
            +  VV   +  P N + F+V+FAAC +V LV AGL+++
Sbjct: 1124 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1161


>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical protein
            F33C8.1a protein.
          Length = 1271

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = +1

Query: 439  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 546
            +  VV   +  P N + F+V+FAAC +V LV AGL+++
Sbjct: 1161 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1198


>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin protein.
          Length = 1329

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = +1

Query: 439  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 546
            +  VV   +  P N + F+V+FAAC +V LV AGL+++
Sbjct: 1161 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1198


>AC024759-3|AAK68433.1|  355|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.3a protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 546 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 632
           D+ H +S L  TWLGH   ++   GV+++
Sbjct: 74  DDFHSESDLFATWLGHATVLVDLEGVKFV 102


>AC024759-2|AAM97964.1|  376|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.3c protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 546 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 632
           D+ H +S L  TWLGH   ++   GV+++
Sbjct: 95  DDFHSESDLFATWLGHATVLVDLEGVKFV 123


>AC024759-1|AAK73907.1|  376|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.3b protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 546 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 632
           D+ H +S L  TWLGH   ++   GV+++
Sbjct: 95  DDFHSESDLFATWLGHATVLVDLEGVKFV 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,146,503
Number of Sequences: 27780
Number of extensions: 358614
Number of successful extensions: 899
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)