Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G13
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0420 - 8298303-8299265,8299351-8299431,8299546-8299668,829... 35 0.061
08_02_1340 - 26256768-26256999,26258105-26258774,26259273-262605... 31 0.75
11_06_0723 - 26688378-26688385,26689351-26689569,26690100-266901... 31 1.3
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 31 1.3
12_02_0626 - 21344530-21344986,21346132-21346469,21347300-213473... 29 3.0
07_03_0377 + 17442942-17443529,17443616-17444158 29 3.0
01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617 29 3.0
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 29 4.0
01_02_0108 - 11200964-11201338 29 4.0
01_02_0036 + 10468636-10468938,10469014-10469109,10469247-104694... 29 4.0
05_04_0156 - 18598926-18599177 29 5.3
04_04_1038 - 30319139-30319357,30319544-30319714,30319803-303198... 29 5.3
02_05_0886 + 32507324-32507938,32508103-32508252,32508498-325089... 29 5.3
08_02_0367 + 16306063-16306199,16306251-16306467 28 7.0
07_01_0164 + 1154942-1155124,1155193-1155199,1155900-1157446 28 7.0
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 28 7.0
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 28 7.0
01_01_0715 - 5542648-5543219,5543352-5543544 28 7.0
11_06_0351 - 22577666-22577989,22578282-22578676,22578961-225793... 28 9.3
07_03_1789 - 29527145-29527204,29527277-29527358,29527457-295275... 28 9.3
06_03_0143 + 17215975-17216745 28 9.3
05_01_0251 + 1901709-1901864,1901968-1901999,1902534-1902664,190... 28 9.3
04_04_0921 - 29431812-29432786 28 9.3
02_05_1127 + 34292894-34293284,34293948-34295443 28 9.3
>03_02_0420 -
8298303-8299265,8299351-8299431,8299546-8299668,
8299815-8299983,8300108-8300478
Length = 568
Score = 35.1 bits (77), Expect = 0.061
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 445 DRVELAPGQVAMPNMSRRSLSQFRIQGPNTSPDEVDRLSATSAWTATTVRKRYTAIDSSD 624
++V VA + S + P+TSP DR +ATS W+ T + + D SD
Sbjct: 319 EKVHPVQNSVAGEKEAPPSWKPHKPPSPSTSPSWSDRSTATSVWSEGTQKGKGVVFDGSD 378
Query: 625 DE 630
+E
Sbjct: 379 EE 380
>08_02_1340 -
26256768-26256999,26258105-26258774,26259273-26260555,
26262403-26263499
Length = 1093
Score = 31.5 bits (68), Expect = 0.75
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +2
Query: 479 CRICPGGRSPSSAYRDRT-PAPTRWTGCPLRARGQPPRSGNDI-PLSTARTTKPATFKTR 652
C+ C + D + P P + G P R+ PPR+G I T PA KT
Sbjct: 702 CKCCSFKSDSEEVFHDLSMPLPPK--GTPARSVASPPRNGRCISQQKTHMELFPAINKTN 759
Query: 653 VPWWHTTSDGG 685
H S+GG
Sbjct: 760 TEKIHAISEGG 770
>11_06_0723 -
26688378-26688385,26689351-26689569,26690100-26690106,
26690194-26690256,26690329-26690400,26690507-26691681,
26692024-26692626,26692643-26692781
Length = 761
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 570 RVDSHHGQETIYRYRQLGRRNRLHSKQG 653
++D+HHG + I Y+Q G+ + KQG
Sbjct: 539 KIDAHHGSKEIQEYQQNGKNKDMVLKQG 566
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -2
Query: 523 PVCGTGRATAGTYSAWPPVPERAPRGPSTKASTCSPFWGICSNTRRP 383
P GT T G + P P P PS+ S +P G CS++ P
Sbjct: 108 PSIGTSPTTPGGGGGYTPTPSDTPPSPSSDTSPSTPGGG-CSSSPTP 153
>12_02_0626 -
21344530-21344986,21346132-21346469,21347300-21347338,
21347572-21347629,21349854-21350136,21350404-21350766,
21350768-21350840
Length = 536
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +3
Query: 435 FVEGPRGARSGTGGHAEYVPAVALPVPHTGTEHQPRRGGPAVRYERVDSHHGQETIYRYR 614
+V GPRG+ + GG + P + + P G+E + ++ G + R + +G++ +
Sbjct: 36 WVAGPRGSEAAAGGQSN--PVLFVLRPFVGSERKAKQVGGSGRAATGERDNGRKAVTGGG 93
Query: 615 QLGRRNRLHSKQGCR--GGTRRA 677
+ GR + + R GG RR+
Sbjct: 94 RSGRGLVVCCQMAPRRGGGERRS 116
>07_03_0377 + 17442942-17443529,17443616-17444158
Length = 376
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 660 HGTLVLNVAGFVVRAVDSGISFPDRGGCPRARSGQPVHLVGAGVRSLYA-ELGERP 496
HG L + + ++ G+S P CPRA V LVG G R A LG RP
Sbjct: 280 HGPLAVGLNAAYMQTYVGGVSCPLV--CPRAWVNHGVLLVGYGERGFAALRLGHRP 333
>01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617
Length = 507
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -2
Query: 508 GRATAGTYSAWPPVPERAPRGPSTKASTCSPFWGICSNTRRPSCKVWTANARRWDPGLAE 329
G A G PVP AP+ PS+ + FWG+C++ + P+ + A W GL +
Sbjct: 250 GAAILGGQYMHLPVP--APQPPSSPGAA-GMFWGLCNDVQAPNNTGHKSCA--WSAGLGQ 304
Query: 328 C*C 320
C
Sbjct: 305 HWC 307
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +3
Query: 606 RYRQLGRRNRLHSKQGCRGGTRRAMVDHXFVRLHHQRHRVGHP 734
R Q GR +R H R G H + HHQR R HP
Sbjct: 528 RRHQKGRHHRHHHDHRHRHGHSHGDHHHHYHGGHHQRRRHHHP 570
>01_02_0108 - 11200964-11201338
Length = 124
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 466 GQVAMPNMSRRSLSQFRIQGPNTSPDEVDRLS 561
G+V P + R + R GP T PD D++S
Sbjct: 28 GRVVFPRVGRGGFAAVRASGPATPPDISDKMS 59
>01_02_0036 +
10468636-10468938,10469014-10469109,10469247-10469453,
10470762-10471097,10471469-10471582,10471634-10471639
Length = 353
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 500 RSPSSAYRDRTPAPTRWTGCPLRARGQPPRSGNDIPLSTARTT 628
R P + R R+ AP GC R GQ GN P + R T
Sbjct: 300 RKPRVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCT 342
>05_04_0156 - 18598926-18599177
Length = 83
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 502 ATAGTYSAWPPVPERAPRGPSTKASTCS 419
A AGTY PP P R+ PS+ +S+ S
Sbjct: 53 AVAGTYQPPPPPPARSSPPPSSSSSSSS 80
>04_04_1038 -
30319139-30319357,30319544-30319714,30319803-30319850,
30319978-30320166
Length = 208
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 556 AGPPRRGWCSVPVC--GTGRATAGTYSAWPP 470
A PP R WC P+C ATAG+ A+ P
Sbjct: 20 APPPPRRWCRSPLCPLPVSAATAGSRLAYIP 50
>02_05_0886 +
32507324-32507938,32508103-32508252,32508498-32508935,
32509038-32509151,32509256-32509852
Length = 637
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 491 PGGRSPSSAYRDRTPAPTRWTGCPLRARGQPPRSGNDIPLSTARTT 628
P R + R R PT GC R GQ GN P + R T
Sbjct: 384 PANRKTRVSVRVRCQGPTMNDGCQWRKYGQKVAKGNPCPRAYYRCT 429
>08_02_0367 + 16306063-16306199,16306251-16306467
Length = 117
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 548 WTGCPLRARGQPPRSGNDIPLSTARTTKPATF 643
W G LR R G D PL T+R + P F
Sbjct: 61 WEGLSLRDPAAAARGGTDQPLLTSRASLPRRF 92
>07_01_0164 + 1154942-1155124,1155193-1155199,1155900-1157446
Length = 578
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/34 (26%), Positives = 23/34 (67%)
Frame = +1
Query: 79 LSEIILYTTIYKNVNVLLNEINSQYERVSTSSQR 180
+ EI+ Y +++ VN +++ + +YER S++ ++
Sbjct: 72 MGEIVSYAVVHETVNKIISGLVDKYERKSSAEEQ 105
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 342 GSQRRAFAVQTLQDGRRVLEQIPQNGLHVLAFVEGPRGARSGTGGHAEYVPAVAL 506
G A AV+ +Q G V EQ+ ++ + F PR AR A+++ VAL
Sbjct: 168 GKYMDATAVKVIQGGPEVGEQLMEHRWDKVLFTGSPRIARVVMAAAAKHLTPVAL 222
>03_02_0740 -
10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +3
Query: 432 AFVEGPRGARSGTGGHAEYVPAVALPVPHTGTEHQPRRGGPAVRYE 569
A + PR RS G + A L VP QP RGGP RY+
Sbjct: 151 AIIWVPRSRRSH-GKVGRWTRAYHLKVPPPPMAPQPPRGGPRQRYQ 195
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 508 GRATAGTYSAWPPVPERAPRGPSTKASTCSPFWGICSNTRRPS 380
G ATA + PP P P P+ + S P G R PS
Sbjct: 134 GNATATPTTPSPPPPPTVPAAPTPRPSPPPPAAGTNGTARAPS 176
>11_06_0351 -
22577666-22577989,22578282-22578676,22578961-22579308,
22579449-22579583,22579664-22579731,22579804-22579869,
22579970-22580041,22580143-22580286,22580392-22580463,
22580805-22580872
Length = 563
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 304 PQTSCPLSIRCKSGCRCGMTYLMRHCTPRV 215
P P +R G G+ YL HC P++
Sbjct: 331 PALDWPTRVRIALGAARGLEYLHEHCNPKI 360
>07_03_1789 -
29527145-29527204,29527277-29527358,29527457-29527524,
29527633-29527722,29527811-29527888,29527969-29528064,
29528217-29528300,29528405-29528605,29528967-29529059,
29529573-29529639,29530843-29530901,29531036-29531202,
29531420-29531509,29531868-29531916,29532109-29532174,
29532260-29532434,29532528-29532649
Length = 548
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/106 (23%), Positives = 41/106 (38%)
Frame = +3
Query: 420 LHVLAFVEGPRGARSGTGGHAEYVPAVALPVPHTGTEHQPRRGGPAVRYERVDSHHGQET 599
LH+ + G GA S Y +P + T Q A R + +
Sbjct: 258 LHISNELNGCPGAYSEAAAKKAYPSCHTVPCEYFETAFQAVENWVADRAVLPLENSLGGS 317
Query: 600 IYRYRQLGRRNRLHSKQGCRGGTRRAMVDHXFVRLHHQRHRVGHPR 737
I+R L R+RLH R R ++ + V++ + R + HP+
Sbjct: 318 IHRNYDLLLRHRLHIVGEVRLAVRHCLLANRGVKIQNLRSAMSHPQ 363
>06_03_0143 + 17215975-17216745
Length = 256
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Frame = -2
Query: 496 AGTYSAWPPVPERAPRGPSTKASTCS-PFWGICSNTRRPSCKVWTAN-ARRWD-----PG 338
AG PP P + +T A+ C PF RRP+C ARR + PG
Sbjct: 178 AGASLPPPPPPSQVGANGTTAAAACDVPFCYCRVRLRRPACAAPAGRAARRLEKACSRPG 237
Query: 337 LAEC 326
LA C
Sbjct: 238 LAGC 241
>05_01_0251 +
1901709-1901864,1901968-1901999,1902534-1902664,
1902740-1902821,1902928-1903054,1903369-1903686,
1903785-1903846,1903988-1904074,1904139-1904195,
1906113-1906197,1906916-1907185,1908158-1908254,
1908390-1908436,1908826-1908939,1909024-1909117,
1909360-1909457,1910356-1910455,1911445-1911521,
1911824-1913122
Length = 1110
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 295 SFAEQALADTSTLLDRDPNGEHLPSRLY 378
+F A+ + +LDRD NG HL S Y
Sbjct: 377 NFVGHAILEAELILDRDGNGGHLCSLYY 404
>04_04_0921 - 29431812-29432786
Length = 324
Score = 27.9 bits (59), Expect = 9.3
Identities = 28/91 (30%), Positives = 33/91 (36%), Gaps = 12/91 (13%)
Frame = -2
Query: 583 WLSTRS*RTAGPPRRGWCSV----------PVCGTGRATAGTYSAWPPVPERAPRGP--S 440
WL R R RRG CS P CG GR +W V RG +
Sbjct: 87 WLVARLARPRAVARRGVCSTGRGGGGSAPGPFCGGGRRWR-RCGSWSAVRGSGGRGARWA 145
Query: 439 TKASTCSPFWGICSNTRRPSCKVWTANARRW 347
A CS G C+ R + W+A RW
Sbjct: 146 AWAGLCSS--GRCAWLRCGGSRWWSAAGGRW 174
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 9/73 (12%)
Frame = -2
Query: 529 SVPVCGTGRATAGTYSAWPPVPERA------PRGPSTKASTCSP--FWGICSNTRRPSCK 374
S P C + + + S+ P P RA P P+ +A SP W + R +
Sbjct: 23 STPTCSAATSRSASRSSRPLAPSRAPGRPRHPPRPTRRAHPASPRASWAEAARLERRRRR 82
Query: 373 VWTAN-ARRWDPG 338
T RRW PG
Sbjct: 83 RATGQPKRRWPPG 95
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,081,135
Number of Sequences: 37544
Number of extensions: 509958
Number of successful extensions: 1921
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1920
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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