Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_G13
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 33 0.85
X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase pro... 32 2.6
D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase pro... 32 2.6
BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein. 32 2.6
BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase p... 32 2.6
BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase p... 32 2.6
AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase p... 32 2.6
AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase p... 32 2.6
AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase v... 32 2.6
AL049637-3|CAI23011.1| 467|Homo sapiens DMRT-like family A2 pro... 31 6.0
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 30 7.9
AE006464-22|AAK61254.1| 1053|Homo sapiens Similar to pre-pro-meg... 30 7.9
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 33.5 bits (73), Expect = 0.85
Identities = 34/140 (24%), Positives = 49/140 (35%)
Frame = +1
Query: 202 TLSPVHAAYSASLDRSSRIGSPTYSVCSTDSSFAEQALADTSTLLDRDPNGEHLPSRLYK 381
T SPV + S +S I +PT S S + L ++T P+
Sbjct: 2307 TPSPVPTTSTTSAATTSTISAPTTSTTSVPGTTPSPVLTTSTTSAPTTRTTSASPAGTTS 2366
Query: 382 MAGEYWNKYPKTDYTYSPLSKDRVELAPGQVAMPNMSRRSLSQFRIQGPNTSPDEVDRLS 561
G + P T +P + + P S S GP T+P V S
Sbjct: 2367 GPGNTPSPVPTTSTISAPTTSITSAPTTSTTSAPTSSTTS-------GPGTTPSPVPTTS 2419
Query: 562 ATSAWTATTVRKRYTAIDSS 621
TSA T +T T+ S+
Sbjct: 2420 ITSAPTTSTTSAPTTSTTSA 2439
Score = 31.9 bits (69), Expect = 2.6
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 409 PKTDYTYSPLSKDRVELAPGQVAMPNMSRRSL-SQFRIQGPNTSPDEVDRLSATSAWTAT 585
P+T TY+ + + P S S+ + I GP T+P V S TSA T +
Sbjct: 2264 PQTSTTYAHTTSTTSAPTARTTSAPTTSTTSVPTTSTISGPKTTPSPVPTTSTTSAATTS 2323
Query: 586 TVRKRYTAIDS 618
T+ T+ S
Sbjct: 2324 TISAPTTSTTS 2334
>X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 526 PNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQNKGAVVAHDERWWITXLFV 702
P ++ ++VD W TVRK+Y+ +D G+ KGAVVA +++ + V
Sbjct: 144 PISNDEDVDN-KVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLV 201
>D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase
protein.
Length = 514
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 526 PNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQNKGAVVAHDERWWITXLFV 702
P ++ ++VD W TVRK+Y+ +D G+ KGAVVA +++ + V
Sbjct: 144 PISNDEDVDN-KVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLV 201
>BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein.
Length = 511
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 526 PNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQNKGAVVAHDERWWITXLFV 702
P ++ ++VD W TVRK+Y+ +D G+ KGAVVA +++ + V
Sbjct: 144 PISNDEDVDN-KVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLV 201
>BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 526 PNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQNKGAVVAHDERWWITXLFV 702
P ++ ++VD W TVRK+Y+ +D G+ KGAVVA +++ + V
Sbjct: 144 PISNDEDVDN-KVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLV 201
>BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 526 PNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQNKGAVVAHDERWWITXLFV 702
P ++ ++VD W TVRK+Y+ +D G+ KGAVVA +++ + V
Sbjct: 144 PISNDEDVDN-KVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLV 201
>AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase
protein.
Length = 536
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 526 PNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQNKGAVVAHDERWWITXLFV 702
P ++ ++VD W TVRK+Y+ +D G+ KGAVVA +++ + V
Sbjct: 144 PISNDEDVDN-KVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLV 201
>AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 526 PNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQNKGAVVAHDERWWITXLFV 702
P ++ ++VD W TVRK+Y+ +D G+ KGAVVA +++ + V
Sbjct: 144 PISNDEDVDN-KVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLV 201
>AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase
variant protein.
Length = 514
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 526 PNTSPDEVDRLSATSAWTATTVRKRYTAIDSSDDETGYIQNKGAVVAHDERWWITXLFV 702
P ++ ++VD W TVRK+Y+ +D G+ KGAVVA +++ + V
Sbjct: 144 PISNDEDVDN-KVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLV 201
>AL049637-3|CAI23011.1| 467|Homo sapiens DMRT-like family A2
protein.
Length = 467
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 562 RTAGPPRRGWCSVPVCGTGRATAGTYSAWPPVPERAPRGPSTKAST-CSP 416
R AG RR C A + WPP +PRGP T++S C+P
Sbjct: 39 RCAGSRRRRRTRRASCSCSTALPRGWR-WPPPTASSPRGPPTRSSVQCAP 87
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 30.3 bits (65), Expect = 7.9
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +1
Query: 409 PKTDYTYSPLSKDRVELAPGQVAMPNMSRRSLSQFRIQ-GPNTSPDEVDRLSATSAWTAT 585
P T T +P + + P S S S I GP T+P V S TSA T +
Sbjct: 83 PTTSTTSAPTTSTTSTPTSSTTSTPQTSTTSASTTSITCGPGTTPSPVPTTSTTSAPTTS 142
Query: 586 TVRKRYTAIDSS 621
T T+ S+
Sbjct: 143 TTSAATTSTISA 154
>AE006464-22|AAK61254.1| 1053|Homo sapiens Similar to
pre-pro-megakarycyte potentiating factor precursor
protein.
Length = 1053
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 586 WWLSTRS*RTAGPPRRGWCSVPVCGT-GRATAGTYSAWPPVPERAPRG 446
W +S + R AG RG P CG GR G + PP RAP G
Sbjct: 359 WQVSGKECRGAGTGGRG--DDPTCGKRGREVGGDWGLRPPQRGRAPTG 404
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,274,812
Number of Sequences: 237096
Number of extensions: 2633814
Number of successful extensions: 8801
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8767
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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